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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181672920
OGOO01000529
117741
Bacteroidota
TAG
Leu
>WENV181672442
OGOO01000007
398829
Bacteroidota
CCT
Arg
>WENV181672447
OGOO01000008
404226
Bacteroidota
CCT
Arg
>WENV181673524
OGOO01004177
175904
Bacteroidota
CGG
Pro
>WENV181674314
OGOO01044205
400161
Bacteroidota
GGT
Thr
>WENV181673607
OGOO01005443
289031
Bacteroidota
CAT
Met
>WENV181673592
OGOO01005158
289031
Bacteroidota
CAT
Met
>WENV181673449
OGOO01003395
289031
Bacteroidota
CAT
Met
>WENV181673410
OGOO01002832
156422
Bacteroidota
TAC
Val
>WENV181673321
OGOO01002028
280553
Bacteroidota
TTT
Lys
>WENV181672706
OGOO01000179
280553
Bacteroidota
TTT
Lys
>WENV181672830
OGOO01000338
280557
Bacteroidota
CAT
Met
>WENV181672779
OGOO01000264
280557
Bacteroidota
CAT
Met
>WENV181673228
OGOO01001486
20492
Bacteroidota
GGA
Ser
>WENV181673337
OGOO01002165
20206
Bacteroidota
GGA
Ser
>WENV181673330
OGOO01002110
483416
Bacteroidota
CTG
Gln
>WENV181672445
OGOO01000008
398871
Bacteroidota
TTC
Glu
>WENV181673730
OGOO01007864
118221
Bacteroidota
CAA
Leu
>WENV181673272
OGOO01001744
56493
Bacteroidota
TGA
Ser
>WENV181672841
OGOO01000367
56493
Bacteroidota
TGA
Ser
>WENV181672839
OGOO01000360
56493
Bacteroidota
TGA
Ser
>WENV181672970
OGOO01000620
175906
Bacteroidota
GTG
His
>WENV181672864
OGOO01000431
175903
Bacteroidota
GTG
His
>WENV181673076
OGOO01000915
291612
Bacteroidota
>WENV181673583
OGOO01004963
118089
Bacteroidota
TAG
Leu
>WENV181674192
OGOO01028744
280530
Bacteroidota
CCA
Trp
>WENV181672810
OGOO01000296
178907
Bacteroidota
TCT
Arg
>WENV181673077
OGOO01000953
405877
Bacteroidota
GGT
Thr
>WENV181673438
OGOO01003278
56385
Bacteroidota
TGA
Ser
>WENV181672526
OGOO01000032
29791
Bacteroidota
GCT
Ser
>WENV181672538
OGOO01000040
182267
Bacteroidota
GTT
Asn
>WENV181672537
OGOO01000040
182267
Bacteroidota
GTT
Asn
>WENV181672749
OGOO01000223
20449
Bacteroidota
GGA
Ser
>WENV181672591
OGOO01000076
20449
Bacteroidota
GGA
Ser
>WENV181673544
OGOO01004437
312035
Bacteroidota
CCA
Trp
>WENV181673594
OGOO01005182
56072
Bacteroidota
TAA
Leu
>WENV181672444
OGOO01000007
56072
Bacteroidota
TAA
Leu
>WENV181673522
OGOO01004106
57807
Bacteroidota
TGA
Ser
>WENV181672701
OGOO01000174
57807
Bacteroidota
TGA
Ser
>WENV181672833
OGOO01000342
175886
Bacteroidota
GGC
Ala
>WENV181672589
OGOO01000074
175902
Bacteroidota
GGC
Ala
>WENV181672541
OGOO01000041
179697
Bacteroidota
TGT
Thr
>WENV181673450
OGOO01003402
280451
Bacteroidota
CGT
Thr
>WENV181672474
OGOO01000016
418894
Bacteroidota
TTC
Glu
>WENV181672473
OGOO01000016
418894
Bacteroidota
TTC
Glu
>WENV181672746
OGOO01000220
99847
Bacteroidota
GTA
Tyr
>WENV181673136
OGOO01001155
399200
Bacteroidota
CAT
Met
>WENV181672503
OGOO01000024
399200
Bacteroidota
CAT
Met
>WENV181674023
OGOO01017381
404109
Bacteroidota
CTC
Glu
>WENV181674022
OGOO01017381
404109
Bacteroidota
CTC
Glu
>WENV181673260
OGOO01001660
186874
Bacteroidota
CAT
Met
>WENV181673714
OGOO01007423
46648
Bacteroidota
TAA
Leu
>WENV181673715
OGOO01007448
332896
Bacteroidota
TTT
Lys
>WENV181673505
OGOO01003931
332896
Bacteroidota
TTT
Lys
>WENV181673143
OGOO01001170
332896
Bacteroidota
TTT
Lys
>WENV181672900
OGOO01000494
332896
Bacteroidota
TTT
Lys
>WENV181672696
OGOO01000160
332896
Bacteroidota
TTT
Lys
>WENV181672660
OGOO01000131
488746
Bacteroidota
CTG
Gln
>WENV181673007
OGOO01000707
280478
Bacteroidota
GCC
Gly
>WENV181673706
OGOO01007134
186108
Bacteroidota
GTT
Asn
>WENV181672907
OGOO01000512
175844
Bacteroidota
GGC
Ala
>WENV181672664
OGOO01000138
73011
Bacteroidota
CAA
Leu
>WENV181672808
OGOO01000293
280515
Bacteroidota
CCA
Trp
>WENV181673629
OGOO01005719
187814
Bacteroidota
GTC
Asp
>WENV181673417
OGOO01002919
187814
Bacteroidota
GTC
Asp
>WENV181673416
OGOO01002919
187814
Bacteroidota
GTC
Asp
>WENV181673415
OGOO01002919
187814
Bacteroidota
GTC
Asp
>WENV181673973
OGOO01015347
183889
Bacteroidota
GGC
Ala
>WENV181673322
OGOO01002057
183889
Bacteroidota
GGC
Ala
>WENV181673050
OGOO01000832
183889
Bacteroidota
GGC
Ala
>WENV181672969
OGOO01000614
158068
Bacteroidota
GGG
Pro
>WENV181672661
OGOO01000131
158068
Bacteroidota
GGG
Pro
>WENV181673722
OGOO01007620
186142
Bacteroidota
GAT
Ile
>WENV181672998
OGOO01000697
398828
Bacteroidota
CCG
Arg
>WENV181672592
OGOO01000076
74084
Bacteroidota
CAG
Leu
>WENV181672572
OGOO01000057
480325
Bacteroidota
CTG
Gln
>WENV181673769
OGOO01008854
176192
Bacteroidota
TCT
Arg
>WENV181672662
OGOO01000135
176192
Bacteroidota
TCT
Arg
>WENV181673311
OGOO01001942
481328
Bacteroidota
TTG
Gln
>WENV181674058
OGOO01019174
400088
Bacteroidota
GGT
Thr
>WENV181673204
OGOO01001375
280446
Bacteroidota
TTT
Lys
>WENV181673414
OGOO01002909
484496
Bacteroidota
TTG
Gln
>WENV181672929
OGOO01000555
484496
Bacteroidota
TTG
Gln
>WENV181672827
OGOO01000332
484496
Bacteroidota
TTG
Gln
>WENV181672733
OGOO01000212
484496
Bacteroidota
TTG
Gln
>WENV181673106
OGOO01001077
285750
Bacteroidota
CCC
Gly
>WENV181674426
OGOO01068118
156467
Bacteroidota
TGG
Pro
>WENV181673723
OGOO01007620
186143
Bacteroidota
TGC
Ala
>WENV181672871
OGOO01000446
398836
Bacteroidota
GCA
Cys
>WENV181672647
OGOO01000125
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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