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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181681372
OGOT01019850
405363
Bacillota
GCA
Cys
>WENV181680909
OGOT01001024
348419
Bacillota
GTT
Asn
>WENV181680954
OGOT01001281
348419
Bacillota
GTT
Asn
>WENV181681152
OGOT01003755
184497
Bacillota
GGG
Pro
>WENV181680979
OGOT01001437
179176
Bacillota
ACG
Arg
>WENV181681282
OGOT01008329
190476
Bacillota
CAT
Met
>WENV181681271
OGOT01007847
280447
Bacillota
GAC
Val
>WENV181681327
OGOT01011408
5692
Bacillota
GCT
Ser
>WENV181681097
OGOT01002779
73009
Bacillota
CAG
Leu
>WENV181680876
OGOT01000826
291581
Bacillota
CGG
Pro
>WENV181681261
OGOT01007134
175859
Bacillota
TCT
Arg
>WENV181681197
OGOT01004960
175831
Bacillota
ACG
Arg
>WENV181681309
OGOT01010572
295350
Bacillota
TGC
Ala
>WENV181680875
OGOT01000826
480322
Bacillota
CTG
Gln
>WENV181681221
OGOT01005775
175868
Bacillota
GTT
Asn
>WENV181681220
OGOT01005775
398854
Bacillota
CTC
Glu
>WENV181681281
OGOT01008286
291576
Bacillota
CCC
Gly
>WENV181681156
OGOT01003940
480324
Bacillota
TTG
Gln
>WENV181681291
OGOT01008898
497729
Bacillota
CCA
Trp
>WENV181680905
OGOT01000974
497729
Bacillota
CCA
Trp
>WENV181681026
OGOT01002081
303718
Bacillota
TGT
Thr
>WENV181681323
OGOT01011218
323864
Bacillota
TGC
Ala
>WENV181681368
OGOT01018362
175911
Bacillota
GTC
Asp
>WENV181681306
OGOT01010344
292374
Bacillota
TGC
Ala
>WENV181680908
OGOT01001024
398857
Bacillota
TTC
Glu
>WENV181680994
OGOT01001636
58120
Bacillota
AAG
Leu
>WENV181681283
OGOT01008329
398832
Bacillota
TTC
Glu
>WENV181680902
OGOT01000943
118669
Bacillota
GTA
Tyr
>WENV181680988
OGOT01001551
175915
Bacillota
GTC
Asp
>WENV181680620
OGOT01000146
398852
Bacillota
CTC
Glu
>WENV181680619
OGOT01000146
398852
Bacillota
CTC
Glu
>WENV181680618
OGOT01000146
398852
Bacillota
CTC
Glu
>WENV181681305
OGOT01010344
201856
Bacillota
GAT
Ile
>WENV181681243
OGOT01006590
398833
Bacillota
TGT
Thr
>WENV181680806
OGOT01000574
179166
Bacillota
TCT
Arg
>WENV181681326
OGOT01011408
56074
Bacillota
TGA
Ser
>WENV181681358
OGOT01014855
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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