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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181684161
OGOV01004584
176499
Actinomycetota
CAT
Met
>WENV181684599
OGOV01014833
175883
Actinomycetota
GAT
Ile
>WENV181684895
OGOV01038800
14009
Actinomycetota
GGA
Ser
>WENV181684887
OGOV01037005
147806
Actinomycetota
TAA
Leu
>WENV181684250
OGOV01005852
280498
Actinomycetota
GTT
Asn
>WENV181684552
OGOV01013016
280498
Actinomycetota
GTT
Asn
>WENV181684626
OGOV01016061
459899
Actinomycetota
TTC
Glu
>WENV181684275
OGOV01006146
140768
Actinomycetota
TAG
Leu
>WENV181684232
OGOV01005546
175837
Actinomycetota
ACG
Arg
>WENV181684725
OGOV01022457
298224
Actinomycetota
GGC
Ala
>WENV181683918
OGOV01002404
241064
Actinomycetota
CTC
Glu
>WENV181684170
OGOV01004652
176638
Actinomycetota
GGG
Pro
>WENV181684292
OGOV01006423
280524
Actinomycetota
TGC
Ala
>WENV181684772
OGOV01024945
481719
Actinomycetota
GCA
Cys
>WENV181685028
OGOV01065610
283313
Actinomycetota
CCG
Arg
>WENV181684771
OGOV01024945
291585
Actinomycetota
GCC
Gly
>WENV181685150
OGOV01099919
117777
Actinomycetota
>WENV181684293
OGOV01006423
280523
Actinomycetota
GGC
Ala
>WENV181684839
OGOV01031885
176555
Actinomycetota
CAT
Met
>WENV181684455
OGOV01009577
287251
Actinomycetota
CTT
Lys
>WENV181684278
OGOV01006186
175841
Actinomycetota
TAT
Ile
>WENV181684801
OGOV01027617
280536
Actinomycetota
CTT
Lys
>WENV181684247
OGOV01005784
175872
Actinomycetota
GTC
Asp
>WENV181684661
OGOV01017856
175926
Actinomycetota
CAT
Met
>WENV181684624
OGOV01015895
480454
Actinomycetota
CCC
Gly
>WENV181684844
OGOV01032511
280450
Actinomycetota
TTT
Lys
>WENV181684584
OGOV01013995
56166
Actinomycetota
TGA
Ser
>WENV181684501
OGOV01010872
358727
Actinomycetota
CCG
Arg
>WENV181684210
OGOV01005242
480329
Actinomycetota
CCC
Gly
>WENV181683917
OGOV01002404
483206
Actinomycetota
CTG
Gln
>WENV181684237
OGOV01005586
175882
Actinomycetota
TGG
Pro
>WENV181685042
OGOV01067924
20209
Actinomycetota
GAG
Leu
>WENV181684305
OGOV01006711
480319
Actinomycetota
TTG
Gln
>WENV181684128
OGOV01004264
280489
Actinomycetota
CTC
Glu
>WENV181684286
OGOV01006363
280499
Actinomycetota
CCT
Arg
>WENV181684129
OGOV01004264
398853
Actinomycetota
CTG
Gln
>WENV181684705
OGOV01021409
175843
Actinomycetota
CAA
Leu
>WENV181684388
OGOV01008387
203883
Actinomycetota
TCT
Arg
>WENV181684003
OGOV01003127
46642
Actinomycetota
CGA
Ser
>WENV181683948
OGOV01002662
104211
Actinomycetota
CAG
Leu
>WENV181684160
OGOV01004584
117903
Actinomycetota
GTA
Tyr
>WENV181683971
OGOV01002897
147796
Actinomycetota
TAA
Leu
>WENV181684274
OGOV01006146
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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