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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181700865
OGPH01000044
290391
Bacillota
TAC
Val
>WENV181701688
OGPH01003471
280428
Bacillota
GAA
Phe
>WENV181701191
OGPH01000421
291579
Bacillota
GAA
Phe
>WENV181701549
OGPH01001917
291579
Bacillota
GAA
Phe
>WENV181701557
OGPH01001968
280492
Bacillota
CTT
Lys
>WENV181701508
OGPH01001665
175842
Bacillota
CAC
Val
>WENV181701049
OGPH01000198
184497
Bacillota
GGG
Pro
>WENV181701288
OGPH01000744
179176
Bacillota
ACG
Arg
>WENV181702261
OGPH01040415
184687
Bacillota
CAT
Met
>WENV181701872
OGPH01007406
184687
Bacillota
CAT
Met
>WENV181701587
OGPH01002452
190476
Bacillota
CAT
Met
>WENV181701401
OGPH01001022
280447
Bacillota
GAC
Val
>WENV181701805
OGPH01006025
5692
Bacillota
GCT
Ser
>WENV181701572
OGPH01002151
73009
Bacillota
CAG
Leu
>WENV181701431
OGPH01001127
407840
Bacillota
TTC
Glu
>WENV181701987
OGPH01011736
175859
Bacillota
TCT
Arg
>WENV181702020
OGPH01012848
280436
Bacillota
TGC
Ala
>WENV181701565
OGPH01002080
175831
Bacillota
ACG
Arg
>WENV181701402
OGPH01001025
284627
Bacillota
GAA
Phe
>WENV181701403
OGPH01001025
484885
Bacillota
TCC
Gly
>WENV181701075
OGPH01000245
480322
Bacillota
CTG
Gln
>WENV181701614
OGPH01002671
401685
Bacillota
TTG
Gln
>WENV181701567
OGPH01002096
175868
Bacillota
GTT
Asn
>WENV181702217
OGPH01031714
314834
Bacillota
TGC
Ala
>WENV181701476
OGPH01001440
322848
Bacillota
CTT
Lys
>WENV181701475
OGPH01001440
398854
Bacillota
CTC
Glu
>WENV181702216
OGPH01031622
291576
Bacillota
CCC
Gly
>WENV181701514
OGPH01001678
480324
Bacillota
TTG
Gln
>WENV181702329
OGPH01055244
180688
Bacillota
GTC
Asp
>WENV181702368
OGPH01064195
332891
Bacillota
TGC
Ala
>WENV181701941
OGPH01009716
323864
Bacillota
TGC
Ala
>WENV181701977
OGPH01011204
175911
Bacillota
GTC
Asp
>WENV181702343
OGPH01057757
292374
Bacillota
TGC
Ala
>WENV181701516
OGPH01001712
398857
Bacillota
TTC
Glu
>WENV181701656
OGPH01003040
280444
Bacillota
GGT
Thr
>WENV181701569
OGPH01002149
317482
Bacillota
TAC
Val
>WENV181702318
OGPH01054105
291597
Bacillota
TGC
Ala
>WENV181702071
OGPH01016315
223045
Bacillota
GAT
Ile
>WENV181701453
OGPH01001255
58120
Bacillota
AAG
Leu
>WENV181701420
OGPH01001102
198522
Bacillota
GAT
Ile
>WENV181701548
OGPH01001906
46835
Bacillota
TAA
Leu
>WENV181700956
OGPH01000110
330413
Bacillota
CTT
Lys
>WENV181701588
OGPH01002452
398832
Bacillota
TTC
Glu
>WENV181701155
OGPH01000365
280476
Bacillota
TTT
Lys
>WENV181701315
OGPH01000817
332651
Bacillota
GTT
Asn
>WENV181702006
OGPH01012272
201856
Bacillota
GAT
Ile
>WENV181701929
OGPH01009050
321248
Bacillota
TAC
Val
>WENV181701613
OGPH01002671
175857
Bacillota
GTG
His
>WENV181700850
OGPH01000034
285756
Bacillota
GCC
Gly
>WENV181702131
OGPH01020779
398833
Bacillota
TGT
Thr
>WENV181702327
OGPH01055244
285556
Bacillota
TGT
Thr
>WENV181701433
OGPH01001138
317820
Bacillota
TAC
Val
>WENV181701804
OGPH01006025
56074
Bacillota
TGA
Ser
>WENV181701417
OGPH01001095
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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