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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181701178
OGPH01000389
117741
Bacteroidota
TAG
Leu
>WENV181702279
OGPH01042738
398829
Bacteroidota
CCT
Arg
>WENV181700882
OGPH01000055
175838
Bacteroidota
GTT
Asn
>WENV181702150
OGPH01022118
175904
Bacteroidota
CGG
Pro
>WENV181700929
OGPH01000075
289031
Bacteroidota
CAT
Met
>WENV181701265
OGPH01000667
280557
Bacteroidota
CAT
Met
>WENV181701126
OGPH01000324
280557
Bacteroidota
CAT
Met
>WENV181700881
OGPH01000052
20492
Bacteroidota
GGA
Ser
>WENV181700919
OGPH01000070
20206
Bacteroidota
GGA
Ser
>WENV181701229
OGPH01000559
483416
Bacteroidota
CTG
Gln
>WENV181701437
OGPH01001151
56493
Bacteroidota
TGA
Ser
>WENV181700808
OGPH01000009
175903
Bacteroidota
GTG
His
>WENV181701319
OGPH01000844
398872
Bacteroidota
GGT
Thr
>WENV181702200
OGPH01027668
280530
Bacteroidota
CCA
Trp
>WENV181701354
OGPH01000933
175936
Bacteroidota
CAT
Met
>WENV181701279
OGPH01000718
29791
Bacteroidota
GCT
Ser
>WENV181700811
OGPH01000010
182267
Bacteroidota
GTT
Asn
>WENV181702121
OGPH01019816
20449
Bacteroidota
GGA
Ser
>WENV181700884
OGPH01000055
56072
Bacteroidota
TAA
Leu
>WENV181701061
OGPH01000219
57807
Bacteroidota
TGA
Ser
>WENV181700807
OGPH01000009
57807
Bacteroidota
TGA
Ser
>WENV181700804
OGPH01000007
57807
Bacteroidota
TGA
Ser
>WENV181700802
OGPH01000004
175886
Bacteroidota
GGC
Ala
>WENV181701072
OGPH01000237
175902
Bacteroidota
GGC
Ala
>WENV181700803
OGPH01000004
179697
Bacteroidota
TGT
Thr
>WENV181701280
OGPH01000718
398860
Bacteroidota
CTC
Glu
>WENV181701308
OGPH01000801
480404
Bacteroidota
TTG
Gln
>WENV181700813
OGPH01000013
280451
Bacteroidota
CGT
Thr
>WENV181701220
OGPH01000518
418894
Bacteroidota
TTC
Glu
>WENV181701113
OGPH01000302
99847
Bacteroidota
GTA
Tyr
>WENV181700960
OGPH01000113
99847
Bacteroidota
GTA
Tyr
>WENV181700957
OGPH01000111
99847
Bacteroidota
GTA
Tyr
>WENV181702323
OGPH01054885
399200
Bacteroidota
CAT
Met
>WENV181701004
OGPH01000153
186874
Bacteroidota
CAT
Met
>WENV181700946
OGPH01000094
332896
Bacteroidota
TTT
Lys
>WENV181700918
OGPH01000070
488746
Bacteroidota
CTG
Gln
>WENV181701162
OGPH01000378
399026
Bacteroidota
CCT
Arg
>WENV181701884
OGPH01007626
280478
Bacteroidota
GCC
Gly
>WENV181700966
OGPH01000122
280532
Bacteroidota
>WENV181701085
OGPH01000259
280515
Bacteroidota
CCA
Trp
>WENV181702000
OGPH01012092
183889
Bacteroidota
GGC
Ala
>WENV181700797
OGPH01000003
480318
Bacteroidota
CTG
Gln
>WENV181700934
OGPH01000079
158068
Bacteroidota
GGG
Pro
>WENV181700812
OGPH01000013
398828
Bacteroidota
CCG
Arg
>WENV181701885
OGPH01007626
74084
Bacteroidota
CAG
Leu
>WENV181701547
OGPH01001895
176192
Bacteroidota
TCT
Arg
>WENV181701342
OGPH01000865
280446
Bacteroidota
TTT
Lys
>WENV181701449
OGPH01001199
484496
Bacteroidota
TTG
Gln
>WENV181700814
OGPH01000015
484496
Bacteroidota
TTG
Gln
>WENV181701129
OGPH01000332
117804
Bacteroidota
TAG
Leu
>WENV181701016
OGPH01000161
398836
Bacteroidota
GCA
Cys
>WENV181700941
OGPH01000087
398836
Bacteroidota
GCA
Cys
>WENV181701144
OGPH01000360
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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