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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181708010
OGPM01000159
179231
Actinomycetota
TAC
Val
>WENV181709196
OGPM01069657
176499
Actinomycetota
CAT
Met
>WENV181709193
OGPM01068778
175883
Actinomycetota
GAT
Ile
>WENV181708987
OGPM01019962
175907
Actinomycetota
TAC
Val
>WENV181708374
OGPM01001382
349003
Actinomycetota
CCG
Arg
>WENV181708305
OGPM01000900
147806
Actinomycetota
TAA
Leu
>WENV181708389
OGPM01001458
280498
Actinomycetota
GTT
Asn
>WENV181708200
OGPM01000525
280498
Actinomycetota
GTT
Asn
>WENV181708058
OGPM01000234
280498
Actinomycetota
GTT
Asn
>WENV181708057
OGPM01000234
280498
Actinomycetota
GTT
Asn
>WENV181708054
OGPM01000228
280498
Actinomycetota
GTT
Asn
>WENV181708728
OGPM01005551
295964
Actinomycetota
GTT
Asn
>WENV181708766
OGPM01006409
56083
Actinomycetota
CGA
Ser
>WENV181708660
OGPM01004470
140768
Actinomycetota
TAG
Leu
>WENV181708006
OGPM01000148
140768
Actinomycetota
TAG
Leu
>WENV181708504
OGPM01002486
176075
Actinomycetota
TCT
Arg
>WENV181708498
OGPM01002370
175837
Actinomycetota
ACG
Arg
>WENV181708497
OGPM01002370
175837
Actinomycetota
ACG
Arg
>WENV181708304
OGPM01000899
175837
Actinomycetota
ACG
Arg
>WENV181708303
OGPM01000899
175837
Actinomycetota
ACG
Arg
>WENV181708731
OGPM01005584
29393
Actinomycetota
GCT
Ser
>WENV181709083
OGPM01037020
280549
Actinomycetota
CAC
Val
>WENV181708228
OGPM01000618
280441
Actinomycetota
CCG
Arg
>WENV181708861
OGPM01010214
280702
Actinomycetota
GGC
Ala
>WENV181708625
OGPM01003943
176077
Actinomycetota
CAT
Met
>WENV181709084
OGPM01037106
298224
Actinomycetota
GGC
Ala
>WENV181708579
OGPM01003380
418858
Actinomycetota
CTG
Gln
>WENV181709019
OGPM01024274
241064
Actinomycetota
CTC
Glu
>WENV181708253
OGPM01000696
176638
Actinomycetota
GGG
Pro
>WENV181708151
OGPM01000413
176638
Actinomycetota
GGG
Pro
>WENV181708738
OGPM01005714
280524
Actinomycetota
TGC
Ala
>WENV181708406
OGPM01001530
280524
Actinomycetota
TGC
Ala
>WENV181708796
OGPM01007639
398948
Actinomycetota
TTC
Glu
>WENV181708434
OGPM01001777
176723
Actinomycetota
TCT
Arg
>WENV181708761
OGPM01006293
117777
Actinomycetota
>WENV181708739
OGPM01005714
280523
Actinomycetota
GGC
Ala
>WENV181708482
OGPM01002249
280523
Actinomycetota
GGC
Ala
>WENV181708407
OGPM01001530
280523
Actinomycetota
GGC
Ala
>WENV181708059
OGPM01000234
280523
Actinomycetota
GGC
Ala
>WENV181708762
OGPM01006293
175949
Actinomycetota
CAT
Met
>WENV181708458
OGPM01002002
176555
Actinomycetota
CAT
Met
>WENV181708674
OGPM01004614
191955
Actinomycetota
TGT
Thr
>WENV181708107
OGPM01000340
175841
Actinomycetota
TAT
Ile
>WENV181708768
OGPM01006515
280544
Actinomycetota
GTG
His
>WENV181708661
OGPM01004470
280496
Actinomycetota
CGT
Thr
>WENV181708496
OGPM01002363
175872
Actinomycetota
GTC
Asp
>WENV181708657
OGPM01004364
280703
Actinomycetota
CCT
Arg
>WENV181708643
OGPM01004064
20205
Actinomycetota
GCT
Ser
>WENV181708632
OGPM01003984
20205
Actinomycetota
GCT
Ser
>WENV181708174
OGPM01000467
280450
Actinomycetota
TTT
Lys
>WENV181708033
OGPM01000194
280450
Actinomycetota
TTT
Lys
>WENV181708659
OGPM01004470
323758
Actinomycetota
CGT
Thr
>WENV181708247
OGPM01000669
56166
Actinomycetota
TGA
Ser
>WENV181708785
OGPM01007352
480329
Actinomycetota
CCC
Gly
>WENV181708472
OGPM01002138
480329
Actinomycetota
CCC
Gly
>WENV181708444
OGPM01001842
175882
Actinomycetota
TGG
Pro
>WENV181708337
OGPM01001047
175882
Actinomycetota
TGG
Pro
>WENV181708651
OGPM01004231
20209
Actinomycetota
GAG
Leu
>WENV181708817
OGPM01008441
99865
Actinomycetota
CAG
Leu
>WENV181708207
OGPM01000538
480319
Actinomycetota
TTG
Gln
>WENV181708003
OGPM01000148
280489
Actinomycetota
CTC
Glu
>WENV181707904
OGPM01000060
280489
Actinomycetota
CTC
Glu
>WENV181708409
OGPM01001543
280499
Actinomycetota
CCT
Arg
>WENV181708014
OGPM01000164
280499
Actinomycetota
CCT
Arg
>WENV181708004
OGPM01000148
398853
Actinomycetota
CTG
Gln
>WENV181707905
OGPM01000060
398853
Actinomycetota
CTG
Gln
>WENV181708336
OGPM01001047
176642
Actinomycetota
CAA
Leu
>WENV181708932
OGPM01014879
175843
Actinomycetota
CAA
Leu
>WENV181708443
OGPM01001842
175843
Actinomycetota
CAA
Leu
>WENV181708319
OGPM01000956
237585
Actinomycetota
TAC
Val
>WENV181708637
OGPM01004024
203883
Actinomycetota
TCT
Arg
>WENV181708794
OGPM01007605
56075
Actinomycetota
TGA
Ser
>WENV181708720
OGPM01005324
46642
Actinomycetota
CGA
Ser
>WENV181708364
OGPM01001292
46642
Actinomycetota
CGA
Ser
>WENV181708462
OGPM01002065
104211
Actinomycetota
CAG
Leu
>WENV181709195
OGPM01069657
117903
Actinomycetota
GTA
Tyr
>WENV181708683
OGPM01004740
56071
Actinomycetota
TGA
Ser
>WENV181708278
OGPM01000804
147796
Actinomycetota
TAA
Leu
>WENV181708005
OGPM01000148
280470
Actinomycetota
CGT
Thr
>WENV181708942
OGPM01016007
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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