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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181710464
OGPO01000113
285360
Bacteroidota
TTT
Lys
>WENV181710949
OGPO01003648
285360
Bacteroidota
TTT
Lys
>WENV181710976
OGPO01004459
117741
Bacteroidota
TAG
Leu
>WENV181711175
OGPO01017368
117741
Bacteroidota
TAG
Leu
>WENV181710873
OGPO01002559
398829
Bacteroidota
CCT
Arg
>WENV181710934
OGPO01003385
175838
Bacteroidota
GTT
Asn
>WENV181710401
OGPO01000023
404226
Bacteroidota
CCT
Arg
>WENV181710454
OGPO01000100
175904
Bacteroidota
CGG
Pro
>WENV181710489
OGPO01000179
400161
Bacteroidota
GGT
Thr
>WENV181710772
OGPO01001410
289031
Bacteroidota
CAT
Met
>WENV181710544
OGPO01000298
156422
Bacteroidota
TAC
Val
>WENV181710590
OGPO01000398
280553
Bacteroidota
TTT
Lys
>WENV181710380
OGPO01000006
280553
Bacteroidota
TTT
Lys
>WENV181710665
OGPO01000755
280557
Bacteroidota
CAT
Met
>WENV181711236
OGPO01024428
20206
Bacteroidota
GGA
Ser
>WENV181710701
OGPO01000974
483416
Bacteroidota
CTG
Gln
>WENV181710400
OGPO01000023
398871
Bacteroidota
TTC
Glu
>WENV181710771
OGPO01001379
118221
Bacteroidota
CAA
Leu
>WENV181710536
OGPO01000273
56493
Bacteroidota
TGA
Ser
>WENV181710446
OGPO01000091
56493
Bacteroidota
TGA
Ser
>WENV181710404
OGPO01000027
175906
Bacteroidota
GTG
His
>WENV181710696
OGPO01000954
175903
Bacteroidota
GTG
His
>WENV181710828
OGPO01001932
351598
Bacteroidota
CGG
Pro
>WENV181710806
OGPO01001729
351598
Bacteroidota
CGG
Pro
>WENV181710409
OGPO01000033
351598
Bacteroidota
CGG
Pro
>WENV181710671
OGPO01000797
118089
Bacteroidota
TAG
Leu
>WENV181710542
OGPO01000287
280530
Bacteroidota
CCA
Trp
>WENV181710455
OGPO01000100
280530
Bacteroidota
CCA
Trp
>WENV181710557
OGPO01000310
203954
Bacteroidota
GTC
Asp
>WENV181710442
OGPO01000086
178907
Bacteroidota
TCT
Arg
>WENV181710545
OGPO01000298
172085
Bacteroidota
TAC
Val
>WENV181710670
OGPO01000791
405877
Bacteroidota
GGT
Thr
>WENV181710452
OGPO01000099
56385
Bacteroidota
TGA
Ser
>WENV181710472
OGPO01000143
20449
Bacteroidota
GGA
Ser
>WENV181710490
OGPO01000179
312035
Bacteroidota
CCA
Trp
>WENV181710619
OGPO01000557
242241
Bacteroidota
GTC
Asp
>WENV181710618
OGPO01000557
242241
Bacteroidota
GTC
Asp
>WENV181710610
OGPO01000514
21127
Bacteroidota
GGA
Ser
>WENV181710971
OGPO01004372
175902
Bacteroidota
GGC
Ala
>WENV181710420
OGPO01000051
480404
Bacteroidota
TTG
Gln
>WENV181710729
OGPO01001173
174201
Bacteroidota
GGG
Pro
>WENV181710630
OGPO01000595
280451
Bacteroidota
CGT
Thr
>WENV181710872
OGPO01002548
99847
Bacteroidota
GTA
Tyr
>WENV181710736
OGPO01001234
99847
Bacteroidota
GTA
Tyr
>WENV181710520
OGPO01000240
99847
Bacteroidota
GTA
Tyr
>WENV181710512
OGPO01000219
399200
Bacteroidota
CAT
Met
>WENV181710461
OGPO01000107
399200
Bacteroidota
CAT
Met
>WENV181710572
OGPO01000330
404109
Bacteroidota
CTC
Glu
>WENV181710571
OGPO01000330
404109
Bacteroidota
CTC
Glu
>WENV181710776
OGPO01001415
186874
Bacteroidota
CAT
Met
>WENV181710752
OGPO01001313
46648
Bacteroidota
TAA
Leu
>WENV181710880
OGPO01002625
488746
Bacteroidota
CTG
Gln
>WENV181710441
OGPO01000081
280478
Bacteroidota
GCC
Gly
>WENV181710853
OGPO01002248
175844
Bacteroidota
GGC
Ala
>WENV181710463
OGPO01000112
175844
Bacteroidota
GGC
Ala
>WENV181710644
OGPO01000639
73011
Bacteroidota
CAA
Leu
>WENV181710902
OGPO01003020
480318
Bacteroidota
CTG
Gln
>WENV181711194
OGPO01019154
398828
Bacteroidota
CCG
Arg
>WENV181710473
OGPO01000143
74084
Bacteroidota
CAG
Leu
>WENV181710954
OGPO01003886
159415
Bacteroidota
TAC
Val
>WENV181710481
OGPO01000164
480325
Bacteroidota
CTG
Gln
>WENV181710588
OGPO01000393
176192
Bacteroidota
TCT
Arg
>WENV181710525
OGPO01000251
481328
Bacteroidota
TTG
Gln
>WENV181710541
OGPO01000287
400088
Bacteroidota
GGT
Thr
>WENV181711088
OGPO01009479
69204
Bacteroidota
TGA
Ser
>WENV181710697
OGPO01000962
484496
Bacteroidota
TTG
Gln
>WENV181710539
OGPO01000280
484496
Bacteroidota
TTG
Gln
>WENV181710850
OGPO01002233
27502
Bacteroidota
GGA
Ser
>WENV181710443
OGPO01000086
285750
Bacteroidota
CCC
Gly
>WENV181710906
OGPO01003067
117804
Bacteroidota
TAG
Leu
>WENV181710839
OGPO01002058
365112
Bacteroidota
TTT
Lys
>WENV181710611
OGPO01000519
365112
Bacteroidota
TTT
Lys
>WENV181710810
OGPO01001757
398836
Bacteroidota
GCA
Cys
>WENV181710786
OGPO01001501
398836
Bacteroidota
GCA
Cys
>WENV181710624
OGPO01000568
398836
Bacteroidota
GCA
Cys
>WENV181710395
OGPO01000018
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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