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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181729766
OGQB01020676
204388
Verrucomicrobiota
CAT
Met
>WENV181729885
OGQB01031149
406043
Verrucomicrobiota
GCA
Cys
>WENV181729594
OGQB01011537
148006
Verrucomicrobiota
CAA
Leu
>WENV181730037
OGQB01059914
101600
Verrucomicrobiota
AAG
Leu
>WENV181729843
OGQB01026821
293105
Verrucomicrobiota
CAT
Met
>WENV181729698
OGQB01015753
405901
Verrucomicrobiota
GCC
Gly
>WENV181729863
OGQB01028934
483642
Verrucomicrobiota
CCC
Gly
>WENV181729955
OGQB01042004
101463
Verrucomicrobiota
TAA
Leu
>WENV181729740
OGQB01018642
293079
Verrucomicrobiota
CGC
Ala
>WENV181729862
OGQB01028934
489412
Verrucomicrobiota
TCC
Gly
>WENV181729886
OGQB01031149
298263
Verrucomicrobiota
TTC
Glu
>WENV181729711
OGQB01016771
293069
Verrucomicrobiota
CTT
Lys
>WENV181729674
OGQB01014615
405940
Verrucomicrobiota
GGT
Thr
>WENV181729710
OGQB01016771
406040
Verrucomicrobiota
CGT
Thr
>WENV181729962
OGQB01045817
57652
Verrucomicrobiota
TGA
Ser
>WENV181729719
OGQB01017490
406039
Verrucomicrobiota
CAC
Val
>WENV181729605
OGQB01011968
406368
Verrucomicrobiota
TTG
Gln
>WENV181729785
OGQB01022149
21159
Verrucomicrobiota
GGA
Ser
>WENV181729580
OGQB01010841
101461
Verrucomicrobiota
GTA
Tyr
>WENV181729974
OGQB01047144
293095
Verrucomicrobiota
TTT
Lys
>WENV181729728
OGQB01018070
187561
Verrucomicrobiota
CGG
Pro
>WENV181729412
OGQB01005629
406342
Verrucomicrobiota
CAT
Met
>WENV181729802
OGQB01022753
406351
Verrucomicrobiota
GTT
Asn
>WENV181729953
OGQB01041584
303305
Verrucomicrobiota
GGC
Ala
>WENV181729723
OGQB01017750
406346
Verrucomicrobiota
TAC
Val
>WENV181729579
OGQB01010832
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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