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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181738868
OGQI01024121
179231
Actinomycetota
TAC
Val
>WENV181738259
OGQI01002690
176499
Actinomycetota
CAT
Met
>WENV181738391
OGQI01004427
175883
Actinomycetota
GAT
Ile
>WENV181738349
OGQI01003718
285746
Actinomycetota
GGC
Ala
>WENV181738874
OGQI01025028
14009
Actinomycetota
GGA
Ser
>WENV181738369
OGQI01004082
349003
Actinomycetota
CCG
Arg
>WENV181737958
OGQI01000815
147806
Actinomycetota
TAA
Leu
>WENV181738567
OGQI01008490
280498
Actinomycetota
GTT
Asn
>WENV181738339
OGQI01003562
280498
Actinomycetota
GTT
Asn
>WENV181738353
OGQI01003737
280503
Actinomycetota
CCT
Arg
>WENV181738676
OGQI01011931
140768
Actinomycetota
TAG
Leu
>WENV181738434
OGQI01005240
140768
Actinomycetota
TAG
Leu
>WENV181738375
OGQI01004153
398843
Actinomycetota
GTT
Asn
>WENV181738527
OGQI01007342
176638
Actinomycetota
GGG
Pro
>WENV181737910
OGQI01000670
176638
Actinomycetota
GGG
Pro
>WENV181738760
OGQI01016049
280524
Actinomycetota
TGC
Ala
>WENV181738393
OGQI01004445
280524
Actinomycetota
TGC
Ala
>WENV181738376
OGQI01004182
481719
Actinomycetota
GCA
Cys
>WENV181738360
OGQI01003947
176723
Actinomycetota
TCT
Arg
>WENV181738616
OGQI01009929
291585
Actinomycetota
GCC
Gly
>WENV181738761
OGQI01016049
280523
Actinomycetota
GGC
Ala
>WENV181738394
OGQI01004445
280523
Actinomycetota
GGC
Ala
>WENV181738257
OGQI01002674
280523
Actinomycetota
GGC
Ala
>WENV181738274
OGQI01002793
175841
Actinomycetota
TAT
Ile
>WENV181738638
OGQI01010518
280536
Actinomycetota
CTT
Lys
>WENV181738670
OGQI01011698
175872
Actinomycetota
GTC
Asp
>WENV181738058
OGQI01001324
175872
Actinomycetota
GTC
Asp
>WENV181738702
OGQI01012930
175926
Actinomycetota
CAT
Met
>WENV181738290
OGQI01002924
280450
Actinomycetota
TTT
Lys
>WENV181737976
OGQI01000905
280450
Actinomycetota
TTT
Lys
>WENV181738075
OGQI01001466
480329
Actinomycetota
CCC
Gly
>WENV181738284
OGQI01002909
483206
Actinomycetota
CTG
Gln
>WENV181737982
OGQI01000911
175882
Actinomycetota
TGG
Pro
>WENV181738305
OGQI01003160
175882
Actinomycetota
TGG
Pro
>WENV181738632
OGQI01010236
20209
Actinomycetota
GAG
Leu
>WENV181738094
OGQI01001541
20209
Actinomycetota
GAG
Leu
>WENV181738374
OGQI01004135
480319
Actinomycetota
TTG
Gln
>WENV181739039
OGQI01044286
280489
Actinomycetota
CTC
Glu
>WENV181738399
OGQI01004558
280499
Actinomycetota
CCT
Arg
>WENV181739040
OGQI01044286
398853
Actinomycetota
CTG
Gln
>WENV181737981
OGQI01000911
176642
Actinomycetota
CAA
Leu
>WENV181738229
OGQI01002384
46642
Actinomycetota
CGA
Ser
>WENV181737895
OGQI01000635
104211
Actinomycetota
CAG
Leu
>WENV181738258
OGQI01002690
117903
Actinomycetota
GTA
Tyr
>WENV181738703
OGQI01013108
56071
Actinomycetota
TGA
Ser
>WENV181738346
OGQI01003587
147796
Actinomycetota
TAA
Leu
>WENV181738675
OGQI01011931
280470
Actinomycetota
CGT
Thr
>WENV181738433
OGQI01005240
280470
Actinomycetota
CGT
Thr
>WENV181738050
OGQI01001271
176162
Actinomycetota
GGG
Pro
>WENV181737939
OGQI01000745
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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