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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181744598
OGQM01001259
343590
Bacillota
GCC
Gly
>WENV181745545
OGQM01046634
234991
Bacillota
GAT
Ile
>WENV181745264
OGQM01015902
280500
Bacillota
TGC
Ala
>WENV181744750
OGQM01002378
349107
Bacillota
GCC
Gly
>WENV181744991
OGQM01006078
349107
Bacillota
GCC
Gly
>WENV181744992
OGQM01006078
405363
Bacillota
GCA
Cys
>WENV181744749
OGQM01002378
280428
Bacillota
GAA
Phe
>WENV181745489
OGQM01039327
179917
Bacillota
CAT
Met
>WENV181744183
OGQM01000169
179917
Bacillota
CAT
Met
>WENV181744184
OGQM01000169
302145
Bacillota
GAA
Phe
>WENV181745308
OGQM01018681
280492
Bacillota
CTT
Lys
>WENV181744952
OGQM01005291
175842
Bacillota
CAC
Val
>WENV181744984
OGQM01005975
184497
Bacillota
GGG
Pro
>WENV181744285
OGQM01000293
184497
Bacillota
GGG
Pro
>WENV181745300
OGQM01017849
179563
Bacillota
GAT
Ile
>WENV181744792
OGQM01002910
179176
Bacillota
ACG
Arg
>WENV181744316
OGQM01000365
179176
Bacillota
ACG
Arg
>WENV181745463
OGQM01035164
352588
Bacillota
CAT
Met
>WENV181744975
OGQM01005740
190476
Bacillota
CAT
Met
>WENV181744908
OGQM01004662
190476
Bacillota
CAT
Met
>WENV181745006
OGQM01006324
280447
Bacillota
GAC
Val
>WENV181745733
OGQM01098485
156218
Bacillota
GAT
Ile
>WENV181745430
OGQM01031019
5692
Bacillota
GCT
Ser
>WENV181745065
OGQM01007951
73009
Bacillota
CAG
Leu
>WENV181745581
OGQM01055644
189473
Bacillota
GAT
Ile
>WENV181744825
OGQM01003219
189473
Bacillota
GAT
Ile
>WENV181744625
OGQM01001412
407726
Bacillota
CTG
Gln
>WENV181745709
OGQM01086714
291581
Bacillota
CGG
Pro
>WENV181745367
OGQM01024402
457631
Bacillota
GCC
Gly
>WENV181744682
OGQM01001763
175859
Bacillota
TCT
Arg
>WENV181745010
OGQM01006418
175831
Bacillota
ACG
Arg
>WENV181745299
OGQM01017849
353153
Bacillota
TGC
Ala
>WENV181745213
OGQM01012570
510876
Bacillota
GGT
Thr
>WENV181745605
OGQM01059981
137739
Bacillota
TAG
Leu
>WENV181744559
OGQM01001121
27216
Bacillota
GCT
Ser
>WENV181744485
OGQM01000736
27216
Bacillota
GCT
Ser
>WENV181745708
OGQM01086714
480322
Bacillota
CTG
Gln
>WENV181744938
OGQM01005162
187364
Bacillota
CAT
Met
>WENV181745034
OGQM01006973
175868
Bacillota
GTT
Asn
>WENV181745033
OGQM01006973
398854
Bacillota
CTC
Glu
>WENV181744795
OGQM01002950
291576
Bacillota
CCC
Gly
>WENV181745727
OGQM01095652
287280
Bacillota
TGT
Thr
>WENV181744900
OGQM01004476
480324
Bacillota
TTG
Gln
>WENV181744393
OGQM01000493
497729
Bacillota
CCA
Trp
>WENV181745048
OGQM01007415
323864
Bacillota
TGC
Ala
>WENV181745675
OGQM01074664
175911
Bacillota
GTC
Asp
>WENV181744666
OGQM01001566
204381
Bacillota
GAT
Ile
>WENV181744268
OGQM01000273
223045
Bacillota
GAT
Ile
>WENV181744602
OGQM01001292
179755
Bacillota
CCG
Arg
>WENV181745546
OGQM01046634
291650
Bacillota
TGC
Ala
>WENV181744063
OGQM01000035
46835
Bacillota
TAA
Leu
>WENV181744976
OGQM01005740
398832
Bacillota
TTC
Glu
>WENV181744909
OGQM01004662
398832
Bacillota
TTC
Glu
>WENV181745491
OGQM01039327
309916
Bacillota
TTT
Lys
>WENV181745669
OGQM01073290
201856
Bacillota
GAT
Ile
>WENV181744348
OGQM01000416
285601
Bacillota
TTC
Glu
>WENV181744347
OGQM01000416
285601
Bacillota
TTC
Glu
>WENV181745097
OGQM01009032
398833
Bacillota
TGT
Thr
>WENV181744990
OGQM01006078
175849
Bacillota
GTC
Asp
>WENV181745429
OGQM01031019
56074
Bacillota
TGA
Ser
>WENV181745061
OGQM01007881
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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