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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181757159
OGQT01010335
99852
Bacillota
GTA
Tyr
>WENV181757104
OGQT01008399
343590
Bacillota
GCC
Gly
>WENV181757487
OGQT01030734
343590
Bacillota
GCC
Gly
>WENV181757350
OGQT01018639
405363
Bacillota
GCA
Cys
>WENV181756180
OGQT01000242
290391
Bacillota
TAC
Val
>WENV181756208
OGQT01000297
290391
Bacillota
TAC
Val
>WENV181757707
OGQT01066666
291579
Bacillota
GAA
Phe
>WENV181756197
OGQT01000255
280492
Bacillota
CTT
Lys
>WENV181756068
OGQT01000093
280492
Bacillota
CTT
Lys
>WENV181757124
OGQT01008928
175842
Bacillota
CAC
Val
>WENV181756946
OGQT01005397
184497
Bacillota
GGG
Pro
>WENV181756397
OGQT01000842
184497
Bacillota
GGG
Pro
>WENV181756156
OGQT01000216
184497
Bacillota
GGG
Pro
>WENV181756679
OGQT01002262
179176
Bacillota
ACG
Arg
>WENV181756356
OGQT01000688
179176
Bacillota
ACG
Arg
>WENV181757807
OGQT01098364
352588
Bacillota
CAT
Met
>WENV181757173
OGQT01010738
190476
Bacillota
CAT
Met
>WENV181756853
OGQT01004246
190476
Bacillota
CAT
Met
>WENV181757354
OGQT01018977
82124
Bacillota
TAA
Leu
>WENV181756105
OGQT01000156
73664
Bacillota
CAG
Leu
>WENV181757067
OGQT01007354
280447
Bacillota
GAC
Val
>WENV181757095
OGQT01008147
5692
Bacillota
GCT
Ser
>WENV181757356
OGQT01019100
175825
Bacillota
GAT
Ile
>WENV181757125
OGQT01008986
73009
Bacillota
CAG
Leu
>WENV181756860
OGQT01004293
73009
Bacillota
CAG
Leu
>WENV181756859
OGQT01004293
73009
Bacillota
CAG
Leu
>WENV181757152
OGQT01010050
481217
Bacillota
GCA
Cys
>WENV181757373
OGQT01019793
291581
Bacillota
CGG
Pro
>WENV181757345
OGQT01018246
291581
Bacillota
CGG
Pro
>WENV181756869
OGQT01004393
175859
Bacillota
TCT
Arg
>WENV181757462
OGQT01028899
175831
Bacillota
ACG
Arg
>WENV181756815
OGQT01003688
510876
Bacillota
GGT
Thr
>WENV181756273
OGQT01000433
284627
Bacillota
GAA
Phe
>WENV181757693
OGQT01065606
137739
Bacillota
TAG
Leu
>WENV181756352
OGQT01000664
27216
Bacillota
GCT
Ser
>WENV181757376
OGQT01019970
480322
Bacillota
CTG
Gln
>WENV181757372
OGQT01019793
480322
Bacillota
CTG
Gln
>WENV181757344
OGQT01018246
480322
Bacillota
CTG
Gln
>WENV181757020
OGQT01006605
480322
Bacillota
CTG
Gln
>WENV181756976
OGQT01005878
187364
Bacillota
CAT
Met
>WENV181756877
OGQT01004544
401685
Bacillota
TTG
Gln
>WENV181757251
OGQT01013092
175868
Bacillota
GTT
Asn
>WENV181757205
OGQT01011405
175868
Bacillota
GTT
Asn
>WENV181757250
OGQT01013092
398854
Bacillota
CTC
Glu
>WENV181757204
OGQT01011405
398854
Bacillota
CTC
Glu
>WENV181757625
OGQT01050322
291576
Bacillota
CCC
Gly
>WENV181757357
OGQT01019129
480324
Bacillota
TTG
Gln
>WENV181757257
OGQT01013537
480324
Bacillota
TTG
Gln
>WENV181757160
OGQT01010392
480324
Bacillota
TTG
Gln
>WENV181756891
OGQT01004720
497729
Bacillota
CCA
Trp
>WENV181756481
OGQT01001079
497729
Bacillota
CCA
Trp
>WENV181757379
OGQT01020348
303718
Bacillota
TGT
Thr
>WENV181757201
OGQT01011296
73638
Bacillota
AAG
Leu
>WENV181756104
OGQT01000156
56079
Bacillota
AAG
Leu
>WENV181755989
OGQT01000033
56079
Bacillota
AAG
Leu
>WENV181756259
OGQT01000408
117745
Bacillota
GTA
Tyr
>WENV181756216
OGQT01000311
117745
Bacillota
GTA
Tyr
>WENV181757439
OGQT01025488
280444
Bacillota
GGT
Thr
>WENV181757212
OGQT01011737
280444
Bacillota
GGT
Thr
>WENV181756803
OGQT01003455
280444
Bacillota
GGT
Thr
>WENV181756727
OGQT01002823
483485
Bacillota
CCC
Gly
>WENV181756004
OGQT01000045
46643
Bacillota
TGA
Ser
>WENV181756075
OGQT01000113
342104
Bacillota
TAC
Val
>WENV181757369
OGQT01019692
223045
Bacillota
GAT
Ile
>WENV181757176
OGQT01010815
179755
Bacillota
CCG
Arg
>WENV181756298
OGQT01000488
330413
Bacillota
CTT
Lys
>WENV181757174
OGQT01010738
398832
Bacillota
TTC
Glu
>WENV181756854
OGQT01004246
398832
Bacillota
TTC
Glu
>WENV181756275
OGQT01000433
118669
Bacillota
GTA
Tyr
>WENV181756261
OGQT01000408
280462
Bacillota
GAA
Phe
>WENV181756001
OGQT01000045
280462
Bacillota
GAA
Phe
>WENV181757490
OGQT01030930
398852
Bacillota
CTC
Glu
>WENV181756702
OGQT01002501
398852
Bacillota
CTC
Glu
>WENV181756085
OGQT01000125
398852
Bacillota
CTC
Glu
>WENV181756027
OGQT01000078
398852
Bacillota
CTC
Glu
>WENV181756006
OGQT01000047
398852
Bacillota
CTC
Glu
>WENV181756739
OGQT01002909
118359
Bacillota
GTA
Tyr
>WENV181757740
OGQT01075526
201856
Bacillota
GAT
Ile
>WENV181756876
OGQT01004544
175857
Bacillota
GTG
His
>WENV181757396
OGQT01022025
398833
Bacillota
TGT
Thr
>WENV181757328
OGQT01017057
398833
Bacillota
TGT
Thr
>WENV181757444
OGQT01026455
516671
Bacillota
TCC
Gly
>WENV181757211
OGQT01011737
175849
Bacillota
GTC
Asp
>WENV181756802
OGQT01003455
175849
Bacillota
GTC
Asp
>WENV181756262
OGQT01000408
280463
Bacillota
TTT
Lys
>WENV181757094
OGQT01008147
56074
Bacillota
TGA
Ser
>WENV181756756
OGQT01003018
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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