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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181775052
OGRF01000627
406043
Verrucomicrobiota
GCA
Cys
>WENV181775036
OGRF01000568
293125
Verrucomicrobiota
GAA
Phe
>WENV181775468
OGRF01004406
406350
Verrucomicrobiota
TGT
Thr
>WENV181775151
OGRF01000994
148006
Verrucomicrobiota
CAA
Leu
>WENV181775400
OGRF01003126
101600
Verrucomicrobiota
AAG
Leu
>WENV181774849
OGRF01000174
293105
Verrucomicrobiota
CAT
Met
>WENV181774968
OGRF01000386
405901
Verrucomicrobiota
GCC
Gly
>WENV181774846
OGRF01000174
405901
Verrucomicrobiota
GCC
Gly
>WENV181775472
OGRF01004465
483642
Verrucomicrobiota
CCC
Gly
>WENV181775035
OGRF01000567
229220
Verrucomicrobiota
CAT
Met
>WENV181774867
OGRF01000191
8960
Verrucomicrobiota
CGA
Ser
>WENV181774979
OGRF01000413
101463
Verrucomicrobiota
TAA
Leu
>WENV181775194
OGRF01001170
157427
Verrucomicrobiota
GTC
Asp
>WENV181775018
OGRF01000526
293079
Verrucomicrobiota
CGC
Ala
>WENV181775021
OGRF01000535
120352
Verrucomicrobiota
TAG
Leu
>WENV181774980
OGRF01000413
292636
Verrucomicrobiota
>WENV181775473
OGRF01004465
489412
Verrucomicrobiota
TCC
Gly
>WENV181775053
OGRF01000627
298263
Verrucomicrobiota
TTC
Glu
>WENV181774847
OGRF01000174
298263
Verrucomicrobiota
TTC
Glu
>WENV181774921
OGRF01000262
293069
Verrucomicrobiota
CTT
Lys
>WENV181774967
OGRF01000384
406336
Verrucomicrobiota
CCT
Arg
>WENV181775508
OGRF01005883
406369
Verrucomicrobiota
CCG
Arg
>WENV181774824
OGRF01000151
405940
Verrucomicrobiota
GGT
Thr
>WENV181775079
OGRF01000732
406044
Verrucomicrobiota
CTG
Gln
>WENV181775107
OGRF01000838
187556
Verrucomicrobiota
GGG
Pro
>WENV181774848
OGRF01000174
406037
Verrucomicrobiota
GTG
His
>WENV181775211
OGRF01001238
406360
Verrucomicrobiota
GAC
Val
>WENV181775006
OGRF01000484
187548
Verrucomicrobiota
TCT
Arg
>WENV181774920
OGRF01000262
406040
Verrucomicrobiota
CGT
Thr
>WENV181775334
OGRF01002199
57652
Verrucomicrobiota
TGA
Ser
>WENV181774988
OGRF01000432
406039
Verrucomicrobiota
CAC
Val
>WENV181774993
OGRF01000440
75458
Verrucomicrobiota
CAG
Leu
>WENV181775366
OGRF01002694
406368
Verrucomicrobiota
TTG
Gln
>WENV181774994
OGRF01000443
21159
Verrucomicrobiota
GGA
Ser
>WENV181774974
OGRF01000396
101461
Verrucomicrobiota
GTA
Tyr
>WENV181775000
OGRF01000471
293095
Verrucomicrobiota
TTT
Lys
>WENV181775269
OGRF01001591
187561
Verrucomicrobiota
CGG
Pro
>WENV181775088
OGRF01000769
406342
Verrucomicrobiota
CAT
Met
>WENV181775507
OGRF01005858
406351
Verrucomicrobiota
GTT
Asn
>WENV181775365
OGRF01002694
303305
Verrucomicrobiota
GGC
Ala
>WENV181775212
OGRF01001238
406346
Verrucomicrobiota
TAC
Val
>WENV181774981
OGRF01000413
8938
Verrucomicrobiota
GCT
Ser
>WENV181775037
OGRF01000568
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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