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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181797049
OGRU01000988
295385
Bacteroidota
CCA
Trp
>WENV181797052
OGRU01000998
285360
Bacteroidota
TTT
Lys
>WENV181797091
OGRU01001160
117741
Bacteroidota
TAG
Leu
>WENV181797911
OGRU01020343
404226
Bacteroidota
CCT
Arg
>WENV181797333
OGRU01002977
175904
Bacteroidota
CGG
Pro
>WENV181796639
OGRU01000033
400161
Bacteroidota
GGT
Thr
>WENV181797682
OGRU01009526
289031
Bacteroidota
CAT
Met
>WENV181797056
OGRU01001024
280557
Bacteroidota
CAT
Met
>WENV181796833
OGRU01000338
20206
Bacteroidota
GGA
Ser
>WENV181797578
OGRU01007102
483416
Bacteroidota
CTG
Gln
>WENV181797910
OGRU01020343
398871
Bacteroidota
TTC
Glu
>WENV181796642
OGRU01000036
118221
Bacteroidota
CAA
Leu
>WENV181797195
OGRU01001763
175903
Bacteroidota
GTG
His
>WENV181797923
OGRU01021401
351598
Bacteroidota
CGG
Pro
>WENV181796972
OGRU01000720
351598
Bacteroidota
CGG
Pro
>WENV181797098
OGRU01001184
118089
Bacteroidota
TAG
Leu
>WENV181796878
OGRU01000448
280530
Bacteroidota
CCA
Trp
>WENV181797449
OGRU01004308
203954
Bacteroidota
GTC
Asp
>WENV181797757
OGRU01012087
178907
Bacteroidota
TCT
Arg
>WENV181796931
OGRU01000551
56385
Bacteroidota
TGA
Ser
>WENV181797010
OGRU01000835
242241
Bacteroidota
GTC
Asp
>WENV181797009
OGRU01000835
242241
Bacteroidota
GTC
Asp
>WENV181798063
OGRU01040118
21127
Bacteroidota
GGA
Ser
>WENV181797594
OGRU01007382
57807
Bacteroidota
TGA
Ser
>WENV181797461
OGRU01004599
57807
Bacteroidota
TGA
Ser
>WENV181797229
OGRU01001933
57807
Bacteroidota
TGA
Ser
>WENV181797334
OGRU01002987
175902
Bacteroidota
GGC
Ala
>WENV181796672
OGRU01000077
480404
Bacteroidota
TTG
Gln
>WENV181797395
OGRU01003576
280451
Bacteroidota
CGT
Thr
>WENV181797259
OGRU01002141
99847
Bacteroidota
GTA
Tyr
>WENV181797221
OGRU01001880
99847
Bacteroidota
GTA
Tyr
>WENV181797359
OGRU01003202
399200
Bacteroidota
CAT
Met
>WENV181796664
OGRU01000060
404109
Bacteroidota
CTC
Glu
>WENV181796663
OGRU01000060
404109
Bacteroidota
CTC
Glu
>WENV181797209
OGRU01001837
46648
Bacteroidota
TAA
Leu
>WENV181796769
OGRU01000219
488746
Bacteroidota
CTG
Gln
>WENV181796808
OGRU01000300
280478
Bacteroidota
GCC
Gly
>WENV181797887
OGRU01018947
186108
Bacteroidota
GTT
Asn
>WENV181797886
OGRU01018947
186108
Bacteroidota
GTT
Asn
>WENV181797992
OGRU01028342
73011
Bacteroidota
CAA
Leu
>WENV181796661
OGRU01000060
178134
Bacteroidota
TGG
Pro
>WENV181796660
OGRU01000060
178134
Bacteroidota
TGG
Pro
>WENV181796858
OGRU01000398
398828
Bacteroidota
CCG
Arg
>WENV181798022
OGRU01032166
481044
Bacteroidota
>WENV181798082
OGRU01045210
480325
Bacteroidota
CTG
Gln
>WENV181798081
OGRU01045210
480325
Bacteroidota
CTG
Gln
>WENV181796888
OGRU01000470
176192
Bacteroidota
TCT
Arg
>WENV181796693
OGRU01000102
481328
Bacteroidota
TTG
Gln
>WENV181797688
OGRU01009838
400088
Bacteroidota
GGT
Thr
>WENV181796811
OGRU01000306
280446
Bacteroidota
TTT
Lys
>WENV181797320
OGRU01002772
484496
Bacteroidota
TTG
Gln
>WENV181797789
OGRU01013606
285750
Bacteroidota
CCC
Gly
>WENV181797518
OGRU01005641
188555
Bacteroidota
CAT
Met
>WENV181797850
OGRU01016717
365112
Bacteroidota
TTT
Lys
>WENV181797743
OGRU01011376
365112
Bacteroidota
TTT
Lys
>WENV181796796
OGRU01000271
365112
Bacteroidota
TTT
Lys
>WENV181796838
OGRU01000353
398836
Bacteroidota
GCA
Cys
>WENV181797291
OGRU01002346
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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