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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181800771
OGRZ01000002
184537
Bacillota
ACG
Arg
>WENV181800796
OGRZ01000012
408526
Bacillota
GCA
Cys
>WENV181800963
OGRZ01000686
282753
Bacillota
TAC
Val
>WENV181801030
OGRZ01004103
400111
Bacillota
GTT
Asn
>WENV181800923
OGRZ01000143
296855
Bacillota
GGT
Thr
>WENV181800802
OGRZ01000015
48505
Bacillota
TGA
Ser
>WENV181800774
OGRZ01000002
289717
Bacillota
CTT
Lys
>WENV181801005
OGRZ01002020
20360
Bacillota
TGA
Ser
>WENV181800981
OGRZ01001197
282752
Bacillota
TTT
Lys
>WENV181800803
OGRZ01000017
20932
Bacillota
GCT
Ser
>WENV181800794
OGRZ01000012
291553
Bacillota
GAA
Phe
>WENV181800850
OGRZ01000046
482593
Bacillota
CCC
Gly
>WENV181801014
OGRZ01003032
339995
Bacillota
TGC
Ala
>WENV181800834
OGRZ01000032
20942
Bacillota
GGA
Ser
>WENV181800761
OGRZ01000001
144756
Bacillota
GTA
Tyr
>WENV181800768
OGRZ01000001
144756
Bacillota
GTA
Tyr
>WENV181801007
OGRZ01002182
399266
Bacillota
>WENV181800983
OGRZ01001197
400112
Bacillota
GCC
Gly
>WENV181800924
OGRZ01000143
184495
Bacillota
CAT
Met
>WENV181800776
OGRZ01000002
141202
Bacillota
CAA
Leu
>WENV181800920
OGRZ01000143
332181
Bacillota
TGT
Thr
>WENV181801008
OGRZ01002655
29614
Bacillota
GGA
Ser
>WENV181800984
OGRZ01001197
480905
Bacillota
TCC
Gly
>WENV181800953
OGRZ01000523
282756
Bacillota
CTT
Lys
>WENV181800872
OGRZ01000061
404091
Bacillota
TTG
Gln
>WENV181800985
OGRZ01001197
178067
Bacillota
TCG
Arg
>WENV181800871
OGRZ01000061
289716
Bacillota
GTG
His
>WENV181800952
OGRZ01000506
314834
Bacillota
TGC
Ala
>WENV181800962
OGRZ01000686
100097
Bacillota
GTA
Tyr
>WENV181801006
OGRZ01002020
20361
Bacillota
GCT
Ser
>WENV181800926
OGRZ01000143
432453
Bacillota
TTC
Glu
>WENV181800893
OGRZ01000094
432453
Bacillota
TTC
Glu
>WENV181800875
OGRZ01000062
480337
Bacillota
TCC
Gly
>WENV181800772
OGRZ01000002
119459
Bacillota
TAG
Leu
>WENV181800979
OGRZ01001197
282757
Bacillota
GTG
His
>WENV181800793
OGRZ01000012
280547
Bacillota
GTC
Asp
>WENV181800890
OGRZ01000094
445407
Bacillota
GCC
Gly
>WENV181800795
OGRZ01000012
445407
Bacillota
GCC
Gly
>WENV181800892
OGRZ01000094
289761
Bacillota
TTT
Lys
>WENV181800873
OGRZ01000061
289761
Bacillota
TTT
Lys
>WENV181800978
OGRZ01001197
176771
Bacillota
TCT
Arg
>WENV181800974
OGRZ01001058
449573
Bacillota
>WENV181800964
OGRZ01000686
282754
Bacillota
TGT
Thr
>WENV181800948
OGRZ01000375
282755
Bacillota
GGT
Thr
>WENV181800927
OGRZ01000143
289715
Bacillota
TAC
Val
>WENV181800894
OGRZ01000094
289715
Bacillota
TAC
Val
>WENV181800877
OGRZ01000062
20943
Bacillota
CGA
Ser
>WENV181800874
OGRZ01000062
208539
Bacillota
TGG
Pro
>WENV181800876
OGRZ01000062
184539
Bacillota
TCT
Arg
>WENV181800980
OGRZ01001197
400113
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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