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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181806877
OGSM01000257
481233
Actinomycetota
CCC
Gly
>WENV181806878
OGSM01000260
280498
Actinomycetota
GTT
Asn
>WENV181806906
OGSM01000499
295964
Actinomycetota
GTT
Asn
>WENV181806957
OGSM01001140
140768
Actinomycetota
TAG
Leu
>WENV181806919
OGSM01000682
176075
Actinomycetota
TCT
Arg
>WENV181806911
OGSM01000548
175848
Actinomycetota
TGG
Pro
>WENV181806934
OGSM01000877
176078
Actinomycetota
GGG
Pro
>WENV181806944
OGSM01001015
59689
Actinomycetota
GGA
Ser
>WENV181806926
OGSM01000750
175837
Actinomycetota
ACG
Arg
>WENV181806925
OGSM01000750
175837
Actinomycetota
ACG
Arg
>WENV181806870
OGSM01000212
29393
Actinomycetota
GCT
Ser
>WENV181806971
OGSM01001678
280549
Actinomycetota
CAC
Val
>WENV181806886
OGSM01000339
349164
Actinomycetota
CTC
Glu
>WENV181806965
OGSM01001430
20450
Actinomycetota
GAG
Leu
>WENV181806913
OGSM01000585
280702
Actinomycetota
GGC
Ala
>WENV181806938
OGSM01000979
176077
Actinomycetota
CAT
Met
>WENV181806873
OGSM01000225
280524
Actinomycetota
TGC
Ala
>WENV181806967
OGSM01001517
398948
Actinomycetota
TTC
Glu
>WENV181806915
OGSM01000595
150272
Actinomycetota
TAA
Leu
>WENV181806868
OGSM01000212
117777
Actinomycetota
>WENV181806869
OGSM01000212
175949
Actinomycetota
CAT
Met
>WENV181806937
OGSM01000963
227544
Actinomycetota
TAC
Val
>WENV181806984
OGSM01008832
176555
Actinomycetota
CAT
Met
>WENV181806939
OGSM01001008
191955
Actinomycetota
TGT
Thr
>WENV181806916
OGSM01000602
280544
Actinomycetota
GTG
His
>WENV181806923
OGSM01000737
280703
Actinomycetota
CCT
Arg
>WENV181806928
OGSM01000775
280450
Actinomycetota
TTT
Lys
>WENV181806970
OGSM01001678
468141
Actinomycetota
GAC
Val
>WENV181806956
OGSM01001140
323758
Actinomycetota
CGT
Thr
>WENV181806920
OGSM01000694
358727
Actinomycetota
CCG
Arg
>WENV181806874
OGSM01000230
56451
Actinomycetota
CGA
Ser
>WENV181806961
OGSM01001358
99865
Actinomycetota
CAG
Leu
>WENV181806871
OGSM01000224
222475
Actinomycetota
CTT
Lys
>WENV181806887
OGSM01000339
398853
Actinomycetota
CTG
Gln
>WENV181806918
OGSM01000632
175843
Actinomycetota
CAA
Leu
>WENV181806872
OGSM01000225
179238
Actinomycetota
GAT
Ile
>WENV181806964
OGSM01001425
60767
Actinomycetota
TGA
Ser
>WENV181806962
OGSM01001391
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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