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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181808793
OGSS01000764
295385
Bacteroidota
CCA
Trp
>WENV181808389
OGSS01000036
117741
Bacteroidota
TAG
Leu
>WENV181808388
OGSS01000036
398829
Bacteroidota
CCT
Arg
>WENV181808901
OGSS01001248
175838
Bacteroidota
GTT
Asn
>WENV181808340
OGSS01000004
404226
Bacteroidota
CCT
Arg
>WENV181808981
OGSS01001897
280557
Bacteroidota
CAT
Met
>WENV181808626
OGSS01000347
280557
Bacteroidota
CAT
Met
>WENV181808617
OGSS01000338
280557
Bacteroidota
CAT
Met
>WENV181808439
OGSS01000076
20206
Bacteroidota
GGA
Ser
>WENV181808373
OGSS01000021
175903
Bacteroidota
GTG
His
>WENV181808663
OGSS01000422
351598
Bacteroidota
CGG
Pro
>WENV181808455
OGSS01000089
351598
Bacteroidota
CGG
Pro
>WENV181808370
OGSS01000019
351598
Bacteroidota
CGG
Pro
>WENV181808418
OGSS01000058
291612
Bacteroidota
>WENV181808405
OGSS01000047
291612
Bacteroidota
>WENV181808811
OGSS01000818
175936
Bacteroidota
CAT
Met
>WENV181808413
OGSS01000052
56072
Bacteroidota
TAA
Leu
>WENV181808869
OGSS01001100
57807
Bacteroidota
TGA
Ser
>WENV181808372
OGSS01000021
57807
Bacteroidota
TGA
Ser
>WENV181808348
OGSS01000007
57807
Bacteroidota
TGA
Ser
>WENV181809040
OGSS01002830
175902
Bacteroidota
GGC
Ala
>WENV181808426
OGSS01000066
398860
Bacteroidota
CTC
Glu
>WENV181808506
OGSS01000146
480404
Bacteroidota
TTG
Gln
>WENV181808477
OGSS01000107
280451
Bacteroidota
CGT
Thr
>WENV181808376
OGSS01000024
99847
Bacteroidota
GTA
Tyr
>WENV181808371
OGSS01000020
99847
Bacteroidota
GTA
Tyr
>WENV181808974
OGSS01001782
332896
Bacteroidota
TTT
Lys
>WENV181808778
OGSS01000721
332896
Bacteroidota
TTT
Lys
>WENV181808565
OGSS01000255
332896
Bacteroidota
TTT
Lys
>WENV181808473
OGSS01000102
332896
Bacteroidota
TTT
Lys
>WENV181808435
OGSS01000074
332896
Bacteroidota
TTT
Lys
>WENV181808352
OGSS01000009
332896
Bacteroidota
TTT
Lys
>WENV181808438
OGSS01000076
488746
Bacteroidota
CTG
Gln
>WENV181808650
OGSS01000394
399026
Bacteroidota
CCT
Arg
>WENV181808393
OGSS01000040
20766
Bacteroidota
GGA
Ser
>WENV181808390
OGSS01000037
186108
Bacteroidota
GTT
Asn
>WENV181808537
OGSS01000198
186108
Bacteroidota
GTT
Asn
>WENV181808587
OGSS01000275
175844
Bacteroidota
GGC
Ala
>WENV181808503
OGSS01000143
280532
Bacteroidota
>WENV181808453
OGSS01000087
229246
Bacteroidota
GGC
Ala
>WENV181808536
OGSS01000194
480318
Bacteroidota
CTG
Gln
>WENV181808952
OGSS01001648
158068
Bacteroidota
GGG
Pro
>WENV181808842
OGSS01000977
158068
Bacteroidota
GGG
Pro
>WENV181808804
OGSS01000798
158068
Bacteroidota
GGG
Pro
>WENV181808354
OGSS01000011
186142
Bacteroidota
GAT
Ile
>WENV181808481
OGSS01000112
398828
Bacteroidota
CCG
Arg
>WENV181808375
OGSS01000022
159415
Bacteroidota
TAC
Val
>WENV181808356
OGSS01000011
159415
Bacteroidota
TAC
Val
>WENV181808378
OGSS01000025
176192
Bacteroidota
TCT
Arg
>WENV181808402
OGSS01000045
280446
Bacteroidota
TTT
Lys
>WENV181808396
OGSS01000041
280446
Bacteroidota
TTT
Lys
>WENV181808379
OGSS01000026
280446
Bacteroidota
TTT
Lys
>WENV181808517
OGSS01000162
484496
Bacteroidota
TTG
Gln
>WENV181808465
OGSS01000096
484496
Bacteroidota
TTG
Gln
>WENV181808387
OGSS01000031
484496
Bacteroidota
TTG
Gln
>WENV181808844
OGSS01000992
188555
Bacteroidota
CAT
Met
>WENV181808539
OGSS01000200
117804
Bacteroidota
TAG
Leu
>WENV181809281
OGSS01023553
186143
Bacteroidota
TGC
Ala
>WENV181808585
OGSS01000275
398836
Bacteroidota
GCA
Cys
>WENV181808543
OGSS01000205
398836
Bacteroidota
GCA
Cys
>WENV181808415
OGSS01000056
398836
Bacteroidota
GCA
Cys
>WENV181808349
OGSS01000007
398836
Bacteroidota
GCA
Cys
>WENV181808833
OGSS01000936
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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