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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181815658
OGTL01000001
510477
Bacillota
TCC
Gly
>WENV181816300
OGTL01001752
195967
Bacillota
CAT
Met
>WENV181816964
OGTL01031814
99852
Bacillota
GTA
Tyr
>WENV181815740
OGTL01000044
343590
Bacillota
GCC
Gly
>WENV181816794
OGTL01012782
234991
Bacillota
GAT
Ile
>WENV181816975
OGTL01033779
280500
Bacillota
TGC
Ala
>WENV181816627
OGTL01006339
349107
Bacillota
GCC
Gly
>WENV181816945
OGTL01028429
405363
Bacillota
GCA
Cys
>WENV181816769
OGTL01011573
280428
Bacillota
GAA
Phe
>WENV181816066
OGTL01000740
405357
Bacillota
TTC
Glu
>WENV181817026
OGTL01042147
291579
Bacillota
GAA
Phe
>WENV181816961
OGTL01030851
481078
Bacillota
TCC
Gly
>WENV181816475
OGTL01003715
183730
Bacillota
CAT
Met
>WENV181816499
OGTL01004091
283762
Bacillota
CCT
Arg
>WENV181817060
OGTL01056829
100095
Bacillota
GTA
Tyr
>WENV181816151
OGTL01000975
280492
Bacillota
CTT
Lys
>WENV181815742
OGTL01000048
280492
Bacillota
CTT
Lys
>WENV181816607
OGTL01005930
175842
Bacillota
CAC
Val
>WENV181815782
OGTL01000103
291629
Bacillota
CCA
Trp
>WENV181816149
OGTL01000967
184497
Bacillota
GGG
Pro
>WENV181815797
OGTL01000125
184497
Bacillota
GGG
Pro
>WENV181816909
OGTL01022631
184086
Bacillota
GTT
Asn
>WENV181815819
OGTL01000154
179176
Bacillota
ACG
Arg
>WENV181815844
OGTL01000200
179176
Bacillota
ACG
Arg
>WENV181815987
OGTL01000499
481167
Bacillota
GCA
Cys
>WENV181816647
OGTL01006864
190476
Bacillota
CAT
Met
>WENV181816126
OGTL01000875
73664
Bacillota
CAG
Leu
>WENV181816741
OGTL01009302
280447
Bacillota
GAC
Val
>WENV181816704
OGTL01008494
280447
Bacillota
GAC
Val
>WENV181816542
OGTL01004490
280447
Bacillota
GAC
Val
>WENV181816950
OGTL01029573
5692
Bacillota
GCT
Ser
>WENV181815911
OGTL01000317
312274
Bacillota
GGC
Ala
>WENV181815863
OGTL01000232
186123
Bacillota
GTC
Asp
>WENV181817003
OGTL01039497
175825
Bacillota
GAT
Ile
>WENV181816084
OGTL01000765
284723
Bacillota
TAC
Val
>WENV181817061
OGTL01056829
481432
Bacillota
CCA
Trp
>WENV181816546
OGTL01004552
73009
Bacillota
CAG
Leu
>WENV181816582
OGTL01005381
481217
Bacillota
GCA
Cys
>WENV181816900
OGTL01021681
291581
Bacillota
CGG
Pro
>WENV181816631
OGTL01006381
175859
Bacillota
TCT
Arg
>WENV181817002
OGTL01039497
280436
Bacillota
TGC
Ala
>WENV181816345
OGTL01002147
21311
Bacillota
GCT
Ser
>WENV181816525
OGTL01004394
175831
Bacillota
ACG
Arg
>WENV181815798
OGTL01000130
332181
Bacillota
TGT
Thr
>WENV181816002
OGTL01000532
283760
Bacillota
GGT
Thr
>WENV181816369
OGTL01002355
284627
Bacillota
GAA
Phe
>WENV181815864
OGTL01000232
291634
Bacillota
GAA
Phe
>WENV181815719
OGTL01000029
346451
Bacillota
TTT
Lys
>WENV181816479
OGTL01003715
20460
Bacillota
GCT
Ser
>WENV181817062
OGTL01056829
282731
Bacillota
GTG
His
>WENV181816974
OGTL01033779
175916
Bacillota
GAT
Ile
>WENV181816370
OGTL01002355
484885
Bacillota
TCC
Gly
>WENV181816899
OGTL01021681
480322
Bacillota
CTG
Gln
>WENV181816051
OGTL01000695
401685
Bacillota
TTG
Gln
>WENV181816829
OGTL01015269
175868
Bacillota
GTT
Asn
>WENV181816802
OGTL01013131
175868
Bacillota
GTT
Asn
>WENV181816534
OGTL01004441
175868
Bacillota
GTT
Asn
>WENV181816075
OGTL01000748
29760
Bacillota
CGA
Ser
>WENV181816785
OGTL01012649
314834
Bacillota
TGC
Ala
>WENV181816872
OGTL01019079
155801
Bacillota
GTC
Asp
>WENV181816828
OGTL01015269
398854
Bacillota
CTC
Glu
>WENV181816801
OGTL01013131
398854
Bacillota
CTC
Glu
>WENV181816482
OGTL01003733
291576
Bacillota
CCC
Gly
>WENV181816467
OGTL01003715
400614
Bacillota
CCG
Arg
>WENV181816845
OGTL01016440
480324
Bacillota
TTG
Gln
>WENV181816130
OGTL01000888
497729
Bacillota
CCA
Trp
>WENV181817069
OGTL01058363
303718
Bacillota
TGT
Thr
>WENV181816328
OGTL01001932
56079
Bacillota
AAG
Leu
>WENV181816032
OGTL01000646
56079
Bacillota
AAG
Leu
>WENV181816780
OGTL01012333
323864
Bacillota
TGC
Ala
>WENV181815988
OGTL01000499
178972
Bacillota
TCT
Arg
>WENV181816810
OGTL01013604
350176
Bacillota
GTT
Asn
>WENV181816851
OGTL01017479
292374
Bacillota
TGC
Ala
>WENV181815967
OGTL01000442
398857
Bacillota
TTC
Glu
>WENV181815963
OGTL01000428
100225
Bacillota
CAG
Leu
>WENV181816164
OGTL01001002
117745
Bacillota
GTA
Tyr
>WENV181816861
OGTL01018557
280444
Bacillota
GGT
Thr
>WENV181816925
OGTL01025457
483485
Bacillota
CCC
Gly
>WENV181816195
OGTL01001133
20461
Bacillota
GGA
Ser
>WENV181817007
OGTL01039929
282733
Bacillota
CGC
Ala
>WENV181817063
OGTL01056829
400101
Bacillota
TTG
Gln
>WENV181816630
OGTL01006373
73616
Bacillota
CAA
Leu
>WENV181816693
OGTL01008301
179755
Bacillota
CCG
Arg
>WENV181816795
OGTL01012782
291650
Bacillota
TGC
Ala
>WENV181816074
OGTL01000748
283761
Bacillota
CGT
Thr
>WENV181816648
OGTL01006864
398832
Bacillota
TTC
Glu
>WENV181816797
OGTL01012926
118669
Bacillota
GTA
Tyr
>WENV181816811
OGTL01013604
400480
Bacillota
CCA
Trp
>WENV181816412
OGTL01002846
74812
Bacillota
TAA
Leu
>WENV181815944
OGTL01000393
280476
Bacillota
TTT
Lys
>WENV181815777
OGTL01000099
280462
Bacillota
GAA
Phe
>WENV181816021
OGTL01000600
398852
Bacillota
CTC
Glu
>WENV181815901
OGTL01000278
398852
Bacillota
CTC
Glu
>WENV181816989
OGTL01038069
201856
Bacillota
GAT
Ile
>WENV181815801
OGTL01000130
289123
Bacillota
GGT
Thr
>WENV181816050
OGTL01000695
175857
Bacillota
GTG
His
>WENV181816691
OGTL01008226
398833
Bacillota
TGT
Thr
>WENV181816958
OGTL01030386
282734
Bacillota
GGT
Thr
>WENV181815704
OGTL01000010
405393
Bacillota
GCC
Gly
>WENV181816194
OGTL01001132
47133
Bacillota
AAG
Leu
>WENV181816329
OGTL01001937
47133
Bacillota
AAG
Leu
>WENV181816949
OGTL01029573
56074
Bacillota
TGA
Ser
>WENV181816771
OGTL01011717
280473
Bacillota
TGG
Pro
>WENV181816677
OGTL01007779
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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