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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181817101
OGTM01000003
481233
Actinomycetota
CCC
Gly
>WENV181817123
OGTM01000008
280498
Actinomycetota
GTT
Asn
>WENV181817122
OGTM01000008
295964
Actinomycetota
GTT
Asn
>WENV181817169
OGTM01000034
140768
Actinomycetota
TAG
Leu
>WENV181817113
OGTM01000007
176075
Actinomycetota
TCT
Arg
>WENV181817144
OGTM01000015
175848
Actinomycetota
TGG
Pro
>WENV181817121
OGTM01000008
176078
Actinomycetota
GGG
Pro
>WENV181817143
OGTM01000015
482604
Actinomycetota
TTG
Gln
>WENV181817110
OGTM01000005
59689
Actinomycetota
GGA
Ser
>WENV181817142
OGTM01000015
175837
Actinomycetota
ACG
Arg
>WENV181817084
OGTM01000001
29393
Actinomycetota
GCT
Ser
>WENV181817119
OGTM01000008
280549
Actinomycetota
CAC
Val
>WENV181817081
OGTM01000001
280549
Actinomycetota
CAC
Val
>WENV181817145
OGTM01000016
20450
Actinomycetota
GAG
Leu
>WENV181817108
OGTM01000005
280441
Actinomycetota
CCG
Arg
>WENV181817141
OGTM01000015
280702
Actinomycetota
GGC
Ala
>WENV181817140
OGTM01000015
280702
Actinomycetota
GGC
Ala
>WENV181817089
OGTM01000001
176077
Actinomycetota
CAT
Met
>WENV181817099
OGTM01000003
280524
Actinomycetota
TGC
Ala
>WENV181817076
OGTM01000001
398948
Actinomycetota
TTC
Glu
>WENV181817202
OGTM01000087
150272
Actinomycetota
TAA
Leu
>WENV181817082
OGTM01000001
117777
Actinomycetota
>WENV181817083
OGTM01000001
175949
Actinomycetota
CAT
Met
>WENV181817118
OGTM01000008
418252
Actinomycetota
GAC
Val
>WENV181817080
OGTM01000001
418252
Actinomycetota
GAC
Val
>WENV181817100
OGTM01000003
191955
Actinomycetota
TGT
Thr
>WENV181817115
OGTM01000007
280544
Actinomycetota
GTG
His
>WENV181817090
OGTM01000001
280703
Actinomycetota
CCT
Arg
>WENV181817106
OGTM01000005
280450
Actinomycetota
TTT
Lys
>WENV181817085
OGTM01000001
56451
Actinomycetota
CGA
Ser
>WENV181817086
OGTM01000001
58099
Actinomycetota
TGA
Ser
>WENV181817097
OGTM01000003
99865
Actinomycetota
CAG
Leu
>WENV181817105
OGTM01000005
398853
Actinomycetota
CTG
Gln
>WENV181817139
OGTM01000015
175843
Actinomycetota
CAA
Leu
>WENV181817104
OGTM01000005
289788
Actinomycetota
CTC
Glu
>WENV181817098
OGTM01000003
179238
Actinomycetota
GAT
Ile
>WENV181817168
OGTM01000034
280470
Actinomycetota
CGT
Thr
>WENV181817107
OGTM01000005
200276
Actinomycetota
CTT
Lys
>WENV181817114
OGTM01000007
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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