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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181820205
OGUC01002099
398829
Bacteroidota
CCT
Arg
>WENV181820394
OGUC01023818
398829
Bacteroidota
CCT
Arg
>WENV181819946
OGUC01000107
400161
Bacteroidota
GGT
Thr
>WENV181820042
OGUC01000487
156422
Bacteroidota
TAC
Val
>WENV181819933
OGUC01000068
280557
Bacteroidota
CAT
Met
>WENV181819977
OGUC01000223
280557
Bacteroidota
CAT
Met
>WENV181820251
OGUC01003455
280557
Bacteroidota
CAT
Met
>WENV181820075
OGUC01000628
20206
Bacteroidota
GGA
Ser
>WENV181819891
OGUC01000022
118221
Bacteroidota
CAA
Leu
>WENV181819924
OGUC01000054
56493
Bacteroidota
TGA
Ser
>WENV181819904
OGUC01000033
56493
Bacteroidota
TGA
Ser
>WENV181819868
OGUC01000002
175903
Bacteroidota
GTG
His
>WENV181820134
OGUC01001002
351598
Bacteroidota
CGG
Pro
>WENV181820037
OGUC01000458
56385
Bacteroidota
TGA
Ser
>WENV181820024
OGUC01000413
182267
Bacteroidota
GTT
Asn
>WENV181819914
OGUC01000046
182267
Bacteroidota
GTT
Asn
>WENV181819947
OGUC01000107
312035
Bacteroidota
CCA
Trp
>WENV181820126
OGUC01000961
242241
Bacteroidota
GTC
Asp
>WENV181820125
OGUC01000961
242241
Bacteroidota
GTC
Asp
>WENV181820023
OGUC01000413
56072
Bacteroidota
TAA
Leu
>WENV181820008
OGUC01000334
56072
Bacteroidota
TAA
Leu
>WENV181819955
OGUC01000125
175902
Bacteroidota
GGC
Ala
>WENV181820158
OGUC01001217
280451
Bacteroidota
CGT
Thr
>WENV181820085
OGUC01000680
99847
Bacteroidota
GTA
Tyr
>WENV181820147
OGUC01001150
404109
Bacteroidota
CTC
Glu
>WENV181819976
OGUC01000214
404109
Bacteroidota
CTC
Glu
>WENV181819952
OGUC01000122
46648
Bacteroidota
TAA
Leu
>WENV181820229
OGUC01002646
488746
Bacteroidota
CTG
Gln
>WENV181820015
OGUC01000384
20766
Bacteroidota
GGA
Ser
>WENV181820113
OGUC01000906
398828
Bacteroidota
CCG
Arg
>WENV181819985
OGUC01000238
398828
Bacteroidota
CCG
Arg
>WENV181820373
OGUC01018317
159415
Bacteroidota
TAC
Val
>WENV181819951
OGUC01000122
481328
Bacteroidota
TTG
Gln
>WENV181820278
OGUC01004536
280446
Bacteroidota
TTT
Lys
>WENV181820104
OGUC01000855
484496
Bacteroidota
TTG
Gln
>WENV181819971
OGUC01000192
365112
Bacteroidota
TTT
Lys
>WENV181819905
OGUC01000033
398836
Bacteroidota
GCA
Cys
>WENV181820191
OGUC01001807
170323
Bacteroidota
GGG
Pro
>WENV181819987
OGUC01000250
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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