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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181862113
OGWS01001248
179231
Actinomycetota
TAC
Val
>WENV181862129
OGWS01001354
176499
Actinomycetota
CAT
Met
>WENV181862530
OGWS01007932
175907
Actinomycetota
TAC
Val
>WENV181862081
OGWS01001025
147806
Actinomycetota
TAA
Leu
>WENV181862056
OGWS01000946
280498
Actinomycetota
GTT
Asn
>WENV181862575
OGWS01009676
295964
Actinomycetota
GTT
Asn
>WENV181862102
OGWS01001187
56083
Actinomycetota
CGA
Ser
>WENV181862278
OGWS01002646
140768
Actinomycetota
TAG
Leu
>WENV181862208
OGWS01001923
140768
Actinomycetota
TAG
Leu
>WENV181862110
OGWS01001229
176075
Actinomycetota
TCT
Arg
>WENV181862624
OGWS01012087
175848
Actinomycetota
TGG
Pro
>WENV181862602
OGWS01010601
20208
Actinomycetota
GAG
Leu
>WENV181862220
OGWS01002062
482604
Actinomycetota
TTG
Gln
>WENV181862214
OGWS01002003
59689
Actinomycetota
GGA
Ser
>WENV181861977
OGWS01000628
175837
Actinomycetota
ACG
Arg
>WENV181862578
OGWS01009752
280549
Actinomycetota
CAC
Val
>WENV181862767
OGWS01024044
187349
Actinomycetota
TGG
Pro
>WENV181862703
OGWS01016501
280441
Actinomycetota
CCG
Arg
>WENV181862221
OGWS01002062
280702
Actinomycetota
GGC
Ala
>WENV181862712
OGWS01017321
176077
Actinomycetota
CAT
Met
>WENV181861846
OGWS01000261
176638
Actinomycetota
GGG
Pro
>WENV181862424
OGWS01005283
484283
Actinomycetota
CTG
Gln
>WENV181862188
OGWS01001748
280524
Actinomycetota
TGC
Ala
>WENV181861938
OGWS01000471
176723
Actinomycetota
TCT
Arg
>WENV181862189
OGWS01001748
280523
Actinomycetota
GGC
Ala
>WENV181862055
OGWS01000946
280523
Actinomycetota
GGC
Ala
>WENV181862713
OGWS01017548
175949
Actinomycetota
CAT
Met
>WENV181862179
OGWS01001713
176555
Actinomycetota
CAT
Met
>WENV181862298
OGWS01002855
191955
Actinomycetota
TGT
Thr
>WENV181862751
OGWS01021659
175841
Actinomycetota
TAT
Ile
>WENV181862453
OGWS01006048
280544
Actinomycetota
GTG
His
>WENV181862209
OGWS01001923
280496
Actinomycetota
CGT
Thr
>WENV181862125
OGWS01001332
280703
Actinomycetota
CCT
Arg
>WENV181862207
OGWS01001923
323758
Actinomycetota
CGT
Thr
>WENV181862428
OGWS01005319
480329
Actinomycetota
CCC
Gly
>WENV181862048
OGWS01000919
175882
Actinomycetota
TGG
Pro
>WENV181862239
OGWS01002221
222475
Actinomycetota
CTT
Lys
>WENV181862539
OGWS01008237
280489
Actinomycetota
CTC
Glu
>WENV181862461
OGWS01006256
280489
Actinomycetota
CTC
Glu
>WENV181862496
OGWS01007066
280499
Actinomycetota
CCT
Arg
>WENV181862540
OGWS01008237
398853
Actinomycetota
CTG
Gln
>WENV181862462
OGWS01006256
398853
Actinomycetota
CTG
Gln
>WENV181862153
OGWS01001509
398853
Actinomycetota
CTG
Gln
>WENV181862757
OGWS01022675
176642
Actinomycetota
CAA
Leu
>WENV181862335
OGWS01003487
175843
Actinomycetota
CAA
Leu
>WENV181862195
OGWS01001799
46642
Actinomycetota
CGA
Ser
>WENV181861829
OGWS01000234
104211
Actinomycetota
CAG
Leu
>WENV181862331
OGWS01003430
317680
Actinomycetota
CCG
Arg
>WENV181862162
OGWS01001604
317680
Actinomycetota
CCG
Arg
>WENV181862196
OGWS01001802
117903
Actinomycetota
GTA
Tyr
>WENV181862737
OGWS01019951
147796
Actinomycetota
TAA
Leu
>WENV181862277
OGWS01002646
280470
Actinomycetota
CGT
Thr
>WENV181862365
OGWS01004070
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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