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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181869513
OGWY01000048
510477
Bacillota
TCC
Gly
>WENV181870093
OGWY01003174
99852
Bacillota
GTA
Tyr
>WENV181870102
OGWY01003284
99852
Bacillota
GTA
Tyr
>WENV181870432
OGWY01009535
343590
Bacillota
GCC
Gly
>WENV181870672
OGWY01019816
343590
Bacillota
GCC
Gly
>WENV181870641
OGWY01018012
349107
Bacillota
GCC
Gly
>WENV181870823
OGWY01031216
349107
Bacillota
GCC
Gly
>WENV181870642
OGWY01018037
280428
Bacillota
GAA
Phe
>WENV181869623
OGWY01000278
302145
Bacillota
GAA
Phe
>WENV181870824
OGWY01031216
280466
Bacillota
TAC
Val
>WENV181869792
OGWY01000901
280492
Bacillota
CTT
Lys
>WENV181869779
OGWY01000780
280492
Bacillota
CTT
Lys
>WENV181870369
OGWY01008005
175842
Bacillota
CAC
Val
>WENV181870058
OGWY01002835
175842
Bacillota
CAC
Val
>WENV181870629
OGWY01017133
179176
Bacillota
ACG
Arg
>WENV181870776
OGWY01027100
352588
Bacillota
CAT
Met
>WENV181870598
OGWY01015356
184687
Bacillota
CAT
Met
>WENV181870891
OGWY01043528
190476
Bacillota
CAT
Met
>WENV181870764
OGWY01026091
82124
Bacillota
TAA
Leu
>WENV181870419
OGWY01009186
73664
Bacillota
CAG
Leu
>WENV181869740
OGWY01000613
73664
Bacillota
CAG
Leu
>WENV181870471
OGWY01010655
280447
Bacillota
GAC
Val
>WENV181870411
OGWY01008967
280447
Bacillota
GAC
Val
>WENV181870248
OGWY01005416
280447
Bacillota
GAC
Val
>WENV181870594
OGWY01015084
5692
Bacillota
GCT
Ser
>WENV181870388
OGWY01008492
5692
Bacillota
GCT
Ser
>WENV181869556
OGWY01000117
312274
Bacillota
GGC
Ala
>WENV181869969
OGWY01001932
186123
Bacillota
GTC
Asp
>WENV181870643
OGWY01018055
73009
Bacillota
CAG
Leu
>WENV181870404
OGWY01008741
73009
Bacillota
CAG
Leu
>WENV181870402
OGWY01008732
73009
Bacillota
CAG
Leu
>WENV181870271
OGWY01005901
73009
Bacillota
CAG
Leu
>WENV181870094
OGWY01003174
73009
Bacillota
CAG
Leu
>WENV181871073
OGWY01085300
481217
Bacillota
GCA
Cys
>WENV181870131
OGWY01003761
280646
Bacillota
TGC
Ala
>WENV181870908
OGWY01046122
189473
Bacillota
GAT
Ile
>WENV181869990
OGWY01002107
407726
Bacillota
CTG
Gln
>WENV181869923
OGWY01001613
291581
Bacillota
CGG
Pro
>WENV181870277
OGWY01005957
175859
Bacillota
TCT
Arg
>WENV181870244
OGWY01005343
175859
Bacillota
TCT
Arg
>WENV181870116
OGWY01003503
175859
Bacillota
TCT
Arg
>WENV181870062
OGWY01002898
175859
Bacillota
TCT
Arg
>WENV181869455
OGWY01000001
332181
Bacillota
TGT
Thr
>WENV181870344
OGWY01007463
187589
Bacillota
CAT
Met
>WENV181871032
OGWY01070223
284627
Bacillota
GAA
Phe
>WENV181869970
OGWY01001932
291634
Bacillota
GAA
Phe
>WENV181870363
OGWY01007940
346451
Bacillota
TTT
Lys
>WENV181869692
OGWY01000506
346451
Bacillota
TTT
Lys
>WENV181870752
OGWY01025016
27216
Bacillota
GCT
Ser
>WENV181870700
OGWY01021434
480322
Bacillota
CTG
Gln
>WENV181870310
OGWY01006694
480322
Bacillota
CTG
Gln
>WENV181870105
OGWY01003320
480322
Bacillota
CTG
Gln
>WENV181869922
OGWY01001613
480322
Bacillota
CTG
Gln
>WENV181870463
OGWY01010467
187364
Bacillota
CAT
Met
>WENV181870713
OGWY01022084
175868
Bacillota
GTT
Asn
>WENV181870581
OGWY01014318
175868
Bacillota
GTT
Asn
>WENV181870316
OGWY01006874
175868
Bacillota
GTT
Asn
>WENV181869993
OGWY01002167
175868
Bacillota
GTT
Asn
>WENV181869837
OGWY01001125
175868
Bacillota
GTT
Asn
>WENV181870712
OGWY01022084
398854
Bacillota
CTC
Glu
>WENV181870580
OGWY01014318
398854
Bacillota
CTC
Glu
>WENV181869992
OGWY01002167
398854
Bacillota
CTC
Glu
>WENV181870476
OGWY01010879
291576
Bacillota
CCC
Gly
>WENV181870389
OGWY01008497
480324
Bacillota
TTG
Gln
>WENV181870356
OGWY01007666
480324
Bacillota
TTG
Gln
>WENV181870069
OGWY01002942
497729
Bacillota
CCA
Trp
>WENV181870127
OGWY01003677
303718
Bacillota
TGT
Thr
>WENV181869919
OGWY01001597
56079
Bacillota
AAG
Leu
>WENV181869918
OGWY01001597
56079
Bacillota
AAG
Leu
>WENV181870583
OGWY01014372
323864
Bacillota
TGC
Ala
>WENV181870699
OGWY01021377
280444
Bacillota
GGT
Thr
>WENV181870657
OGWY01019088
280444
Bacillota
GGT
Thr
>WENV181870835
OGWY01032742
483485
Bacillota
CCC
Gly
>WENV181870458
OGWY01010204
46643
Bacillota
TGA
Ser
>WENV181869744
OGWY01000644
342104
Bacillota
TAC
Val
>WENV181869827
OGWY01001088
223045
Bacillota
GAT
Ile
>WENV181870528
OGWY01012619
179755
Bacillota
CCG
Arg
>WENV181870892
OGWY01043528
398832
Bacillota
TTC
Glu
>WENV181870078
OGWY01003004
25955
Bacillota
GCT
Ser
>WENV181870446
OGWY01010020
118669
Bacillota
GTA
Tyr
>WENV181870033
OGWY01002494
118669
Bacillota
GTA
Tyr
>WENV181869759
OGWY01000702
280462
Bacillota
GAA
Phe
>WENV181870801
OGWY01029042
398852
Bacillota
CTC
Glu
>WENV181870725
OGWY01022712
398852
Bacillota
CTC
Glu
>WENV181870689
OGWY01020658
398852
Bacillota
CTC
Glu
>WENV181869875
OGWY01001294
398852
Bacillota
CTC
Glu
>WENV181869854
OGWY01001194
398852
Bacillota
CTC
Glu
>WENV181869529
OGWY01000075
398852
Bacillota
CTC
Glu
>WENV181869458
OGWY01000001
289123
Bacillota
GGT
Thr
>WENV181870549
OGWY01013050
175857
Bacillota
GTG
His
>WENV181869996
OGWY01002170
285756
Bacillota
GCC
Gly
>WENV181870270
OGWY01005868
398833
Bacillota
TGT
Thr
>WENV181870143
OGWY01003947
398833
Bacillota
TGT
Thr
>WENV181870599
OGWY01015373
398833
Bacillota
TGT
Thr
>WENV181870825
OGWY01031216
175849
Bacillota
GTC
Asp
>WENV181870551
OGWY01013050
280463
Bacillota
TTT
Lys
>WENV181871054
OGWY01078799
280486
Bacillota
TGC
Ala
>WENV181869578
OGWY01000167
405393
Bacillota
GCC
Gly
>WENV181870593
OGWY01015084
56074
Bacillota
TGA
Ser
>WENV181870387
OGWY01008492
56074
Bacillota
TGA
Ser
>WENV181870511
OGWY01011739
280473
Bacillota
TGG
Pro
>WENV181870260
OGWY01005659
280473
Bacillota
TGG
Pro
>WENV181870202
OGWY01004784
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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