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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181879722
OGXF01001700
117741
Bacteroidota
TAG
Leu
>WENV181880107
OGXF01012042
175904
Bacteroidota
CGG
Pro
>WENV181880219
OGXF01032615
280553
Bacteroidota
TTT
Lys
>WENV181879473
OGXF01000408
280557
Bacteroidota
CAT
Met
>WENV181879953
OGXF01004457
280557
Bacteroidota
CAT
Met
>WENV181879858
OGXF01002955
20206
Bacteroidota
GGA
Ser
>WENV181879596
OGXF01000868
56493
Bacteroidota
TGA
Ser
>WENV181879595
OGXF01000849
175903
Bacteroidota
GTG
His
>WENV181880037
OGXF01006828
351598
Bacteroidota
CGG
Pro
>WENV181879821
OGXF01002401
351598
Bacteroidota
CGG
Pro
>WENV181880204
OGXF01027375
118089
Bacteroidota
TAG
Leu
>WENV181880005
OGXF01005911
175902
Bacteroidota
GGC
Ala
>WENV181879798
OGXF01002288
174201
Bacteroidota
GGG
Pro
>WENV181879659
OGXF01001303
174201
Bacteroidota
GGG
Pro
>WENV181880143
OGXF01016032
280451
Bacteroidota
CGT
Thr
>WENV181879669
OGXF01001354
99847
Bacteroidota
GTA
Tyr
>WENV181880175
OGXF01019862
399200
Bacteroidota
CAT
Met
>WENV181879740
OGXF01001774
488746
Bacteroidota
CTG
Gln
>WENV181879566
OGXF01000714
398828
Bacteroidota
CCG
Arg
>WENV181880161
OGXF01017414
480325
Bacteroidota
CTG
Gln
>WENV181879894
OGXF01003512
69204
Bacteroidota
TGA
Ser
>WENV181879829
OGXF01002464
484496
Bacteroidota
TTG
Gln
>WENV181879468
OGXF01000401
484496
Bacteroidota
TTG
Gln
>WENV181879993
OGXF01005553
27502
Bacteroidota
GGA
Ser
>WENV181879907
OGXF01003655
27502
Bacteroidota
GGA
Ser
>WENV181879903
OGXF01003616
27502
Bacteroidota
GGA
Ser
>WENV181879721
OGXF01001688
365112
Bacteroidota
TTT
Lys
>WENV181879990
OGXF01005499
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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