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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181880419
OGXG01000631
510477
Bacillota
TCC
Gly
>WENV181881215
OGXG01062080
377363
Bacillota
GAA
Phe
>WENV181880605
OGXG01002638
99852
Bacillota
GTA
Tyr
>WENV181880847
OGXG01010456
212982
Bacillota
ACG
Arg
>WENV181880582
OGXG01001993
343590
Bacillota
GCC
Gly
>WENV181881155
OGXG01043774
280500
Bacillota
TGC
Ala
>WENV181880778
OGXG01007548
349107
Bacillota
GCC
Gly
>WENV181880924
OGXG01015331
480520
Bacillota
TCC
Gly
>WENV181880938
OGXG01015917
405363
Bacillota
GCA
Cys
>WENV181881015
OGXG01022582
290391
Bacillota
TAC
Val
>WENV181880264
OGXG01000039
302145
Bacillota
GAA
Phe
>WENV181880779
OGXG01007548
280466
Bacillota
TAC
Val
>WENV181880643
OGXG01003332
280492
Bacillota
CTT
Lys
>WENV181880676
OGXG01004443
175842
Bacillota
CAC
Val
>WENV181880523
OGXG01001413
175842
Bacillota
CAC
Val
>WENV181880846
OGXG01010456
46774
Bacillota
TAA
Leu
>WENV181881208
OGXG01060173
184497
Bacillota
GGG
Pro
>WENV181881177
OGXG01050054
179563
Bacillota
GAT
Ile
>WENV181881056
OGXG01028422
179176
Bacillota
ACG
Arg
>WENV181880245
OGXG01000006
295166
Bacillota
TGC
Ala
>WENV181881126
OGXG01039853
141334
Bacillota
TAG
Leu
>WENV181880732
OGXG01006086
190476
Bacillota
CAT
Met
>WENV181881127
OGXG01039853
176014
Bacillota
TCT
Arg
>WENV181880365
OGXG01000297
73664
Bacillota
CAG
Leu
>WENV181880294
OGXG01000098
73664
Bacillota
CAG
Leu
>WENV181880947
OGXG01016677
280447
Bacillota
GAC
Val
>WENV181880750
OGXG01006617
280447
Bacillota
GAC
Val
>WENV181880614
OGXG01002835
5692
Bacillota
GCT
Ser
>WENV181880374
OGXG01000355
186123
Bacillota
GTC
Asp
>WENV181880562
OGXG01001699
73009
Bacillota
CAG
Leu
>WENV181881120
OGXG01037888
399266
Bacillota
>WENV181880874
OGXG01011772
280646
Bacillota
TGC
Ala
>WENV181880528
OGXG01001431
291581
Bacillota
CGG
Pro
>WENV181880539
OGXG01001481
175859
Bacillota
TCT
Arg
>WENV181881210
OGXG01060586
175831
Bacillota
ACG
Arg
>WENV181881176
OGXG01050054
353153
Bacillota
TGC
Ala
>WENV181880544
OGXG01001521
179810
Bacillota
TCT
Arg
>WENV181880891
OGXG01013494
284627
Bacillota
GAA
Phe
>WENV181880375
OGXG01000355
291634
Bacillota
GAA
Phe
>WENV181880329
OGXG01000194
346451
Bacillota
TTT
Lys
>WENV181880265
OGXG01000040
27216
Bacillota
GCT
Ser
>WENV181880783
OGXG01007671
480322
Bacillota
CTG
Gln
>WENV181880762
OGXG01007005
480322
Bacillota
CTG
Gln
>WENV181880549
OGXG01001536
480322
Bacillota
CTG
Gln
>WENV181880527
OGXG01001431
480322
Bacillota
CTG
Gln
>WENV181880787
OGXG01007739
175868
Bacillota
GTT
Asn
>WENV181880848
OGXG01010456
208754
Bacillota
TGG
Pro
>WENV181880901
OGXG01013869
120584
Bacillota
GTA
Tyr
>WENV181880451
OGXG01000769
291576
Bacillota
CCC
Gly
>WENV181880761
OGXG01006941
480324
Bacillota
TTG
Gln
>WENV181880628
OGXG01003097
497729
Bacillota
CCA
Trp
>WENV181881093
OGXG01033073
178143
Bacillota
TTC
Glu
>WENV181881080
OGXG01031653
175899
Bacillota
GTC
Asp
>WENV181880427
OGXG01000668
73638
Bacillota
AAG
Leu
>WENV181880363
OGXG01000297
56079
Bacillota
AAG
Leu
>WENV181880364
OGXG01000297
56079
Bacillota
AAG
Leu
>WENV181881172
OGXG01048195
292374
Bacillota
TGC
Ala
>WENV181880512
OGXG01001286
398857
Bacillota
TTC
Glu
>WENV181880536
OGXG01001472
117745
Bacillota
GTA
Tyr
>WENV181880904
OGXG01013930
280444
Bacillota
GGT
Thr
>WENV181881046
OGXG01026363
483485
Bacillota
CCC
Gly
>WENV181880926
OGXG01015331
354380
Bacillota
TTT
Lys
>WENV181880745
OGXG01006544
46643
Bacillota
TGA
Ser
>WENV181880827
OGXG01009615
223045
Bacillota
GAT
Ile
>WENV181881196
OGXG01056136
179755
Bacillota
CCG
Arg
>WENV181880855
OGXG01010713
46835
Bacillota
TAA
Leu
>WENV181880733
OGXG01006086
398832
Bacillota
TTC
Glu
>WENV181880925
OGXG01015331
203851
Bacillota
TCT
Arg
>WENV181880956
OGXG01017012
449573
Bacillota
>WENV181880700
OGXG01005012
118669
Bacillota
GTA
Tyr
>WENV181880390
OGXG01000462
280462
Bacillota
GAA
Phe
>WENV181880534
OGXG01001458
398852
Bacillota
CTC
Glu
>WENV181880533
OGXG01001458
398852
Bacillota
CTC
Glu
>WENV181880532
OGXG01001458
398852
Bacillota
CTC
Glu
>WENV181880491
OGXG01001058
398852
Bacillota
CTC
Glu
>WENV181880900
OGXG01013869
399260
Bacillota
TGT
Thr
>WENV181881171
OGXG01048195
201856
Bacillota
GAT
Ile
>WENV181880461
OGXG01000854
289123
Bacillota
GGT
Thr
>WENV181880420
OGXG01000631
184539
Bacillota
TCT
Arg
>WENV181881159
OGXG01044526
298260
Bacillota
GTT
Asn
>WENV181880545
OGXG01001521
175857
Bacillota
GTG
His
>WENV181880718
OGXG01005438
398833
Bacillota
TGT
Thr
>WENV181880780
OGXG01007548
175849
Bacillota
GTC
Asp
>WENV181880291
OGXG01000089
405393
Bacillota
GCC
Gly
>WENV181880613
OGXG01002835
56074
Bacillota
TGA
Ser
>WENV181880967
OGXG01017266
280473
Bacillota
TGG
Pro
>WENV181880583
OGXG01002084
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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