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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181893196
OGXQ01000536
176499
Actinomycetota
CAT
Met
>WENV181893691
OGXQ01004630
175883
Actinomycetota
GAT
Ile
>WENV181893393
OGXQ01001508
175907
Actinomycetota
TAC
Val
>WENV181893120
OGXQ01000291
280498
Actinomycetota
GTT
Asn
>WENV181893469
OGXQ01002128
280498
Actinomycetota
GTT
Asn
>WENV181893521
OGXQ01002458
280503
Actinomycetota
CCT
Arg
>WENV181893735
OGXQ01004951
459899
Actinomycetota
TTC
Glu
>WENV181893884
OGXQ01009163
56083
Actinomycetota
CGA
Ser
>WENV181893620
OGXQ01003667
140768
Actinomycetota
TAG
Leu
>WENV181893831
OGXQ01007133
20208
Actinomycetota
GAG
Leu
>WENV181893410
OGXQ01001667
59689
Actinomycetota
GGA
Ser
>WENV181893274
OGXQ01000911
175837
Actinomycetota
ACG
Arg
>WENV181893562
OGXQ01002869
29393
Actinomycetota
GCT
Ser
>WENV181894201
OGXQ01035974
280549
Actinomycetota
CAC
Val
>WENV181893614
OGXQ01003644
280441
Actinomycetota
CCG
Arg
>WENV181894038
OGXQ01017148
280702
Actinomycetota
GGC
Ala
>WENV181893269
OGXQ01000867
398843
Actinomycetota
GTT
Asn
>WENV181893711
OGXQ01004816
176077
Actinomycetota
CAT
Met
>WENV181893155
OGXQ01000387
241064
Actinomycetota
CTC
Glu
>WENV181893132
OGXQ01000337
176638
Actinomycetota
GGG
Pro
>WENV181893390
OGXQ01001462
280524
Actinomycetota
TGC
Ala
>WENV181893778
OGXQ01005848
291585
Actinomycetota
GCC
Gly
>WENV181893851
OGXQ01007928
150272
Actinomycetota
TAA
Leu
>WENV181893763
OGXQ01005390
117777
Actinomycetota
>WENV181893375
OGXQ01001404
280523
Actinomycetota
GGC
Ala
>WENV181893411
OGXQ01001667
175949
Actinomycetota
CAT
Met
>WENV181893231
OGXQ01000652
191955
Actinomycetota
TGT
Thr
>WENV181893810
OGXQ01006695
175841
Actinomycetota
TAT
Ile
>WENV181893652
OGXQ01004102
280544
Actinomycetota
GTG
His
>WENV181893117
OGXQ01000289
280536
Actinomycetota
CTT
Lys
>WENV181893633
OGXQ01003816
280496
Actinomycetota
CGT
Thr
>WENV181893736
OGXQ01004951
175872
Actinomycetota
GTC
Asp
>WENV181894030
OGXQ01015573
280703
Actinomycetota
CCT
Arg
>WENV181893128
OGXQ01000333
20205
Actinomycetota
GCT
Ser
>WENV181893007
OGXQ01000031
175926
Actinomycetota
CAT
Met
>WENV181893214
OGXQ01000603
280450
Actinomycetota
TTT
Lys
>WENV181894230
OGXQ01044586
323758
Actinomycetota
CGT
Thr
>WENV181893402
OGXQ01001584
358727
Actinomycetota
CCG
Arg
>WENV181893263
OGXQ01000852
480329
Actinomycetota
CCC
Gly
>WENV181893154
OGXQ01000387
483206
Actinomycetota
CTG
Gln
>WENV181893001
OGXQ01000019
175882
Actinomycetota
TGG
Pro
>WENV181893020
OGXQ01000051
20209
Actinomycetota
GAG
Leu
>WENV181893261
OGXQ01000826
222475
Actinomycetota
CTT
Lys
>WENV181893710
OGXQ01004792
480319
Actinomycetota
TTG
Gln
>WENV181893173
OGXQ01000462
280489
Actinomycetota
CTC
Glu
>WENV181893102
OGXQ01000241
280499
Actinomycetota
CCT
Arg
>WENV181893174
OGXQ01000462
398853
Actinomycetota
CTG
Gln
>WENV181893000
OGXQ01000019
175843
Actinomycetota
CAA
Leu
>WENV181893323
OGXQ01001136
237585
Actinomycetota
TAC
Val
>WENV181893161
OGXQ01000415
203883
Actinomycetota
TCT
Arg
>WENV181893367
OGXQ01001345
46642
Actinomycetota
CGA
Ser
>WENV181893208
OGXQ01000557
104211
Actinomycetota
CAG
Leu
>WENV181893195
OGXQ01000536
117903
Actinomycetota
GTA
Tyr
>WENV181893268
OGXQ01000863
56071
Actinomycetota
TGA
Ser
>WENV181893069
OGXQ01000128
147796
Actinomycetota
TAA
Leu
>WENV181893619
OGXQ01003667
280470
Actinomycetota
CGT
Thr
>WENV181893209
OGXQ01000557
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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