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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181900283
OGXV01004033
99852
Bacillota
GTA
Tyr
>WENV181900705
OGXV01035807
356775
Bacillota
TGT
Thr
>WENV181900757
OGXV01045079
234991
Bacillota
GAT
Ile
>WENV181900688
OGXV01033115
405363
Bacillota
GCA
Cys
>WENV181900497
OGXV01012834
280428
Bacillota
GAA
Phe
>WENV181900635
OGXV01025678
221826
Bacillota
ACG
Arg
>WENV181899906
OGXV01000178
280492
Bacillota
CTT
Lys
>WENV181900426
OGXV01008816
175842
Bacillota
CAC
Val
>WENV181900085
OGXV01001140
291629
Bacillota
CCA
Trp
>WENV181900149
OGXV01001767
184497
Bacillota
GGG
Pro
>WENV181899943
OGXV01000342
179176
Bacillota
ACG
Arg
>WENV181900713
OGXV01037039
215243
Bacillota
CAT
Met
>WENV181900448
OGXV01009694
190476
Bacillota
CAT
Met
>WENV181900548
OGXV01016840
399153
Bacillota
TTC
Glu
>WENV181900472
OGXV01010919
280447
Bacillota
GAC
Val
>WENV181900096
OGXV01001212
280447
Bacillota
GAC
Val
>WENV181900246
OGXV01003207
5692
Bacillota
GCT
Ser
>WENV181900305
OGXV01004446
312274
Bacillota
GGC
Ala
>WENV181899961
OGXV01000403
186123
Bacillota
GTC
Asp
>WENV181900624
OGXV01023876
175825
Bacillota
GAT
Ile
>WENV181899975
OGXV01000504
73009
Bacillota
CAG
Leu
>WENV181900253
OGXV01003266
407726
Bacillota
CTG
Gln
>WENV181900455
OGXV01009798
291581
Bacillota
CGG
Pro
>WENV181900361
OGXV01005858
175859
Bacillota
TCT
Arg
>WENV181899842
OGXV01000021
398835
Bacillota
GCC
Gly
>WENV181900623
OGXV01023876
280436
Bacillota
TGC
Ala
>WENV181900352
OGXV01005656
175831
Bacillota
ACG
Arg
>WENV181899956
OGXV01000402
332181
Bacillota
TGT
Thr
>WENV181900064
OGXV01001048
284627
Bacillota
GAA
Phe
>WENV181899837
OGXV01000015
284627
Bacillota
GAA
Phe
>WENV181899962
OGXV01000403
291634
Bacillota
GAA
Phe
>WENV181899998
OGXV01000544
346451
Bacillota
TTT
Lys
>WENV181899883
OGXV01000108
346451
Bacillota
TTT
Lys
>WENV181900326
OGXV01005056
484885
Bacillota
TCC
Gly
>WENV181899838
OGXV01000015
484885
Bacillota
TCC
Gly
>WENV181900457
OGXV01009928
480322
Bacillota
CTG
Gln
>WENV181900454
OGXV01009798
480322
Bacillota
CTG
Gln
>WENV181900463
OGXV01010259
187364
Bacillota
CAT
Met
>WENV181900200
OGXV01002560
175868
Bacillota
GTT
Asn
>WENV181900372
OGXV01006170
322848
Bacillota
CTT
Lys
>WENV181900199
OGXV01002560
398854
Bacillota
CTC
Glu
>WENV181900683
OGXV01031827
291576
Bacillota
CCC
Gly
>WENV181900577
OGXV01018659
480324
Bacillota
TTG
Gln
>WENV181900739
OGXV01041404
400963
Bacillota
GTT
Asn
>WENV181900674
OGXV01030438
400963
Bacillota
GTT
Asn
>WENV181900836
OGXV01069070
180688
Bacillota
GTC
Asp
>WENV181900453
OGXV01009742
323864
Bacillota
TGC
Ala
>WENV181900436
OGXV01009143
175911
Bacillota
GTC
Asp
>WENV181900773
OGXV01049045
292374
Bacillota
TGC
Ala
>WENV181900653
OGXV01027621
186051
Bacillota
GAT
Ile
>WENV181899967
OGXV01000424
398857
Bacillota
TTC
Glu
>WENV181900466
OGXV01010494
280444
Bacillota
GGT
Thr
>WENV181900140
OGXV01001676
483485
Bacillota
CCC
Gly
>WENV181900279
OGXV01003911
179755
Bacillota
CCG
Arg
>WENV181900220
OGXV01002720
58120
Bacillota
AAG
Leu
>WENV181900055
OGXV01000995
58120
Bacillota
AAG
Leu
>WENV181900758
OGXV01045079
291650
Bacillota
TGC
Ala
>WENV181900449
OGXV01009694
398832
Bacillota
TTC
Glu
>WENV181900772
OGXV01049045
201856
Bacillota
GAT
Ile
>WENV181899959
OGXV01000402
289123
Bacillota
GGT
Thr
>WENV181900697
OGXV01034871
298260
Bacillota
GTT
Asn
>WENV181900334
OGXV01005084
298260
Bacillota
GTT
Asn
>WENV181900254
OGXV01003286
298260
Bacillota
GTT
Asn
>WENV181900581
OGXV01019330
406186
Bacillota
CTC
Glu
>WENV181900366
OGXV01005942
398833
Bacillota
TGT
Thr
>WENV181900491
OGXV01012527
175849
Bacillota
GTC
Asp
>WENV181900687
OGXV01033043
280486
Bacillota
TGC
Ala
>WENV181900114
OGXV01001410
405393
Bacillota
GCC
Gly
>WENV181899963
OGXV01000403
405393
Bacillota
GCC
Gly
>WENV181900245
OGXV01003207
56074
Bacillota
TGA
Ser
>WENV181900336
OGXV01005172
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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