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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181905711
OGXY01001573
295385
Bacteroidota
CCA
Trp
>WENV181905725
OGXY01001722
285360
Bacteroidota
TTT
Lys
>WENV181905611
OGXY01000802
117741
Bacteroidota
TAG
Leu
>WENV181905573
OGXY01000638
175838
Bacteroidota
GTT
Asn
>WENV181905278
OGXY01000023
404226
Bacteroidota
CCT
Arg
>WENV181905279
OGXY01000025
175904
Bacteroidota
CGG
Pro
>WENV181905490
OGXY01000351
400161
Bacteroidota
GGT
Thr
>WENV181905636
OGXY01000958
289031
Bacteroidota
CAT
Met
>WENV181905414
OGXY01000153
280557
Bacteroidota
CAT
Met
>WENV181905355
OGXY01000069
280557
Bacteroidota
CAT
Met
>WENV181905543
OGXY01000517
20206
Bacteroidota
GGA
Ser
>WENV181905331
OGXY01000048
483416
Bacteroidota
CTG
Gln
>WENV181905277
OGXY01000023
398871
Bacteroidota
TTC
Glu
>WENV181905504
OGXY01000381
201819
Bacteroidota
CAT
Met
>WENV181905511
OGXY01000394
56493
Bacteroidota
TGA
Ser
>WENV181905316
OGXY01000040
175906
Bacteroidota
GTG
His
>WENV181905319
OGXY01000041
175903
Bacteroidota
GTG
His
>WENV181905746
OGXY01002035
351598
Bacteroidota
CGG
Pro
>WENV181905733
OGXY01001855
351598
Bacteroidota
CGG
Pro
>WENV181905329
OGXY01000045
351598
Bacteroidota
CGG
Pro
>WENV181906046
OGXY01009941
291612
Bacteroidota
>WENV181905256
OGXY01000013
118089
Bacteroidota
TAG
Leu
>WENV181905280
OGXY01000025
280530
Bacteroidota
CCA
Trp
>WENV181905577
OGXY01000654
203954
Bacteroidota
GTC
Asp
>WENV181905247
OGXY01000007
178907
Bacteroidota
TCT
Arg
>WENV181905449
OGXY01000237
172085
Bacteroidota
TAC
Val
>WENV181905282
OGXY01000025
20449
Bacteroidota
GGA
Ser
>WENV181905710
OGXY01001560
57807
Bacteroidota
TGA
Ser
>WENV181905332
OGXY01000049
175902
Bacteroidota
GGC
Ala
>WENV181905769
OGXY01002474
480404
Bacteroidota
TTG
Gln
>WENV181905510
OGXY01000386
174201
Bacteroidota
GGG
Pro
>WENV181905435
OGXY01000204
174201
Bacteroidota
GGG
Pro
>WENV181905371
OGXY01000081
174201
Bacteroidota
GGG
Pro
>WENV181905565
OGXY01000608
280451
Bacteroidota
CGT
Thr
>WENV181905420
OGXY01000165
99847
Bacteroidota
GTA
Tyr
>WENV181905693
OGXY01001362
399200
Bacteroidota
CAT
Met
>WENV181905311
OGXY01000038
399200
Bacteroidota
CAT
Met
>WENV181905232
OGXY01000002
399200
Bacteroidota
CAT
Met
>WENV181905323
OGXY01000042
404109
Bacteroidota
CTC
Glu
>WENV181905298
OGXY01000031
186874
Bacteroidota
CAT
Met
>WENV181905542
OGXY01000497
46648
Bacteroidota
TAA
Leu
>WENV181905743
OGXY01001977
488746
Bacteroidota
CTG
Gln
>WENV181905374
OGXY01000082
175844
Bacteroidota
GGC
Ala
>WENV181905257
OGXY01000013
73011
Bacteroidota
CAA
Leu
>WENV181905632
OGXY01000930
398828
Bacteroidota
CCG
Arg
>WENV181905620
OGXY01000849
191205
Bacteroidota
TGG
Pro
>WENV181905283
OGXY01000025
74084
Bacteroidota
CAG
Leu
>WENV181905476
OGXY01000316
159415
Bacteroidota
TAC
Val
>WENV181905248
OGXY01000008
480325
Bacteroidota
CTG
Gln
>WENV181906115
OGXY01015079
176192
Bacteroidota
TCT
Arg
>WENV181905622
OGXY01000865
176192
Bacteroidota
TCT
Arg
>WENV181905368
OGXY01000076
491385
Bacteroidota
TTG
Gln
>WENV181905876
OGXY01004078
69204
Bacteroidota
TGA
Ser
>WENV181905695
OGXY01001371
69204
Bacteroidota
TGA
Ser
>WENV181905584
OGXY01000701
69204
Bacteroidota
TGA
Ser
>WENV181905572
OGXY01000628
69204
Bacteroidota
TGA
Ser
>WENV181905372
OGXY01000081
280446
Bacteroidota
TTT
Lys
>WENV181905465
OGXY01000280
484496
Bacteroidota
TTG
Gln
>WENV181905463
OGXY01000277
484496
Bacteroidota
TTG
Gln
>WENV181905392
OGXY01000108
484496
Bacteroidota
TTG
Gln
>WENV181905540
OGXY01000491
27502
Bacteroidota
GGA
Ser
>WENV181905369
OGXY01000077
27502
Bacteroidota
GGA
Ser
>WENV181905320
OGXY01000041
27502
Bacteroidota
GGA
Ser
>WENV181905308
OGXY01000035
27502
Bacteroidota
GGA
Ser
>WENV181905431
OGXY01000195
285750
Bacteroidota
CCC
Gly
>WENV181905246
OGXY01000007
285750
Bacteroidota
CCC
Gly
>WENV181905886
OGXY01004194
365112
Bacteroidota
TTT
Lys
>WENV181905630
OGXY01000904
398836
Bacteroidota
GCA
Cys
>WENV181905538
OGXY01000481
398836
Bacteroidota
GCA
Cys
>WENV181905452
OGXY01000241
398836
Bacteroidota
GCA
Cys
>WENV181905344
OGXY01000061
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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