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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181927502
OGYN01010452
117741
Bacteroidota
TAG
Leu
>WENV181926794
OGYN01000715
404226
Bacteroidota
CCT
Arg
>WENV181927137
OGYN01002904
400161
Bacteroidota
GGT
Thr
>WENV181926756
OGYN01000620
289031
Bacteroidota
CAT
Met
>WENV181927084
OGYN01002509
289031
Bacteroidota
CAT
Met
>WENV181927601
OGYN01014131
156422
Bacteroidota
TAC
Val
>WENV181926467
OGYN01000105
280553
Bacteroidota
TTT
Lys
>WENV181927391
OGYN01007549
280557
Bacteroidota
CAT
Met
>WENV181927011
OGYN01001806
483416
Bacteroidota
CTG
Gln
>WENV181926792
OGYN01000715
398871
Bacteroidota
TTC
Glu
>WENV181926793
OGYN01000715
398871
Bacteroidota
TTC
Glu
>WENV181927507
OGYN01010544
118221
Bacteroidota
CAA
Leu
>WENV181927057
OGYN01002208
56493
Bacteroidota
TGA
Ser
>WENV181926990
OGYN01001705
56493
Bacteroidota
TGA
Ser
>WENV181926543
OGYN01000217
175906
Bacteroidota
GTG
His
>WENV181926542
OGYN01000217
175906
Bacteroidota
GTG
His
>WENV181927411
OGYN01008188
351598
Bacteroidota
CGG
Pro
>WENV181927346
OGYN01006631
351598
Bacteroidota
CGG
Pro
>WENV181927216
OGYN01004133
118089
Bacteroidota
TAG
Leu
>WENV181926491
OGYN01000140
118089
Bacteroidota
TAG
Leu
>WENV181928058
OGYN01065499
398872
Bacteroidota
GGT
Thr
>WENV181926966
OGYN01001522
280530
Bacteroidota
CCA
Trp
>WENV181927293
OGYN01005660
175936
Bacteroidota
CAT
Met
>WENV181926407
OGYN01000048
203954
Bacteroidota
GTC
Asp
>WENV181926570
OGYN01000254
178907
Bacteroidota
TCT
Arg
>WENV181928050
OGYN01063605
56385
Bacteroidota
TGA
Ser
>WENV181927195
OGYN01003771
182267
Bacteroidota
GTT
Asn
>WENV181927194
OGYN01003771
182267
Bacteroidota
GTT
Asn
>WENV181926928
OGYN01001273
20449
Bacteroidota
GGA
Ser
>WENV181926393
OGYN01000043
20449
Bacteroidota
GGA
Ser
>WENV181927138
OGYN01002904
312035
Bacteroidota
CCA
Trp
>WENV181927537
OGYN01011640
242241
Bacteroidota
GTC
Asp
>WENV181927536
OGYN01011640
242241
Bacteroidota
GTC
Asp
>WENV181926844
OGYN01000890
56072
Bacteroidota
TAA
Leu
>WENV181927452
OGYN01008998
175886
Bacteroidota
GGC
Ala
>WENV181927909
OGYN01041979
175902
Bacteroidota
GGC
Ala
>WENV181927069
OGYN01002367
179697
Bacteroidota
TGT
Thr
>WENV181927795
OGYN01028160
480404
Bacteroidota
TTG
Gln
>WENV181927690
OGYN01019974
480404
Bacteroidota
TTG
Gln
>WENV181927163
OGYN01003114
280451
Bacteroidota
CGT
Thr
>WENV181927214
OGYN01004116
418894
Bacteroidota
TTC
Glu
>WENV181927213
OGYN01004116
418894
Bacteroidota
TTC
Glu
>WENV181927160
OGYN01003090
99847
Bacteroidota
GTA
Tyr
>WENV181926696
OGYN01000432
99847
Bacteroidota
GTA
Tyr
>WENV181927182
OGYN01003409
399200
Bacteroidota
CAT
Met
>WENV181926520
OGYN01000181
399200
Bacteroidota
CAT
Met
>WENV181926519
OGYN01000181
399200
Bacteroidota
CAT
Met
>WENV181927224
OGYN01004281
404109
Bacteroidota
CTC
Glu
>WENV181927223
OGYN01004281
404109
Bacteroidota
CTC
Glu
>WENV181927671
OGYN01017907
186874
Bacteroidota
CAT
Met
>WENV181927359
OGYN01006871
46648
Bacteroidota
TAA
Leu
>WENV181927941
OGYN01045173
488746
Bacteroidota
CTG
Gln
>WENV181927046
OGYN01002045
399026
Bacteroidota
CCT
Arg
>WENV181926891
OGYN01001090
20766
Bacteroidota
GGA
Ser
>WENV181927317
OGYN01006064
175844
Bacteroidota
GGC
Ala
>WENV181926640
OGYN01000308
175844
Bacteroidota
GGC
Ala
>WENV181927528
OGYN01011172
280532
Bacteroidota
>WENV181927200
OGYN01003926
229246
Bacteroidota
GGC
Ala
>WENV181927764
OGYN01024864
73011
Bacteroidota
CAA
Leu
>WENV181926780
OGYN01000686
280515
Bacteroidota
CCA
Trp
>WENV181926947
OGYN01001425
183889
Bacteroidota
GGC
Ala
>WENV181927556
OGYN01012346
158068
Bacteroidota
GGG
Pro
>WENV181927444
OGYN01008824
158068
Bacteroidota
GGG
Pro
>WENV181927037
OGYN01002016
158068
Bacteroidota
GGG
Pro
>WENV181928071
OGYN01067814
398828
Bacteroidota
CCG
Arg
>WENV181927026
OGYN01001923
74084
Bacteroidota
CAG
Leu
>WENV181927594
OGYN01013824
159415
Bacteroidota
TAC
Val
>WENV181926682
OGYN01000398
480325
Bacteroidota
CTG
Gln
>WENV181926681
OGYN01000398
480325
Bacteroidota
CTG
Gln
>WENV181927781
OGYN01027176
176192
Bacteroidota
TCT
Arg
>WENV181926969
OGYN01001552
176192
Bacteroidota
TCT
Arg
>WENV181926712
OGYN01000517
176192
Bacteroidota
TCT
Arg
>WENV181927268
OGYN01005107
481328
Bacteroidota
TTG
Gln
>WENV181927714
OGYN01021613
400088
Bacteroidota
GGT
Thr
>WENV181927429
OGYN01008602
280446
Bacteroidota
TTT
Lys
>WENV181927250
OGYN01004762
280446
Bacteroidota
TTT
Lys
>WENV181926921
OGYN01001204
280446
Bacteroidota
TTT
Lys
>WENV181927201
OGYN01003928
484496
Bacteroidota
TTG
Gln
>WENV181926897
OGYN01001127
285750
Bacteroidota
CCC
Gly
>WENV181926488
OGYN01000128
285750
Bacteroidota
CCC
Gly
>WENV181927320
OGYN01006110
117804
Bacteroidota
TAG
Leu
>WENV181927419
OGYN01008380
398836
Bacteroidota
GCA
Cys
>WENV181927386
OGYN01007403
398836
Bacteroidota
GCA
Cys
>WENV181927330
OGYN01006281
398836
Bacteroidota
GCA
Cys
>WENV181926953
OGYN01001458
398836
Bacteroidota
GCA
Cys
>WENV181926826
OGYN01000855
398836
Bacteroidota
GCA
Cys
>WENV181926351
OGYN01000007
398836
Bacteroidota
GCA
Cys
>WENV181927115
OGYN01002753
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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