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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181944931
OGZB01000532
172207
Bacteroidota
GGG
Pro
>WENV181945088
OGZB01001491
172207
Bacteroidota
GGG
Pro
>WENV181945230
OGZB01003061
172207
Bacteroidota
GGG
Pro
>WENV181945422
OGZB01006840
117741
Bacteroidota
TAG
Leu
>WENV181945384
OGZB01005943
175838
Bacteroidota
GTT
Asn
>WENV181945385
OGZB01005943
175838
Bacteroidota
GTT
Asn
>WENV181944829
OGZB01000177
404226
Bacteroidota
CCT
Arg
>WENV181945471
OGZB01009464
175904
Bacteroidota
CGG
Pro
>WENV181945206
OGZB01002669
280557
Bacteroidota
CAT
Met
>WENV181944917
OGZB01000465
280557
Bacteroidota
CAT
Met
>WENV181945189
OGZB01002494
20492
Bacteroidota
GGA
Ser
>WENV181945039
OGZB01001096
20206
Bacteroidota
GGA
Ser
>WENV181945513
OGZB01012166
398871
Bacteroidota
TTC
Glu
>WENV181945494
OGZB01010973
201819
Bacteroidota
CAT
Met
>WENV181945062
OGZB01001286
56493
Bacteroidota
TGA
Ser
>WENV181944783
OGZB01000052
56493
Bacteroidota
TGA
Ser
>WENV181945040
OGZB01001146
175903
Bacteroidota
GTG
His
>WENV181945484
OGZB01009984
351598
Bacteroidota
CGG
Pro
>WENV181945505
OGZB01011672
118089
Bacteroidota
TAG
Leu
>WENV181944949
OGZB01000628
398872
Bacteroidota
GGT
Thr
>WENV181945472
OGZB01009464
280530
Bacteroidota
CCA
Trp
>WENV181945227
OGZB01002973
175936
Bacteroidota
CAT
Met
>WENV181945444
OGZB01008031
178907
Bacteroidota
TCT
Arg
>WENV181944853
OGZB01000244
29791
Bacteroidota
GCT
Ser
>WENV181945581
OGZB01019260
20449
Bacteroidota
GGA
Ser
>WENV181945404
OGZB01006405
56072
Bacteroidota
TAA
Leu
>WENV181945363
OGZB01005255
56072
Bacteroidota
TAA
Leu
>WENV181945100
OGZB01001645
175902
Bacteroidota
GGC
Ala
>WENV181944854
OGZB01000244
398860
Bacteroidota
CTC
Glu
>WENV181945440
OGZB01007741
480404
Bacteroidota
TTG
Gln
>WENV181945606
OGZB01021982
280451
Bacteroidota
CGT
Thr
>WENV181945168
OGZB01002232
99847
Bacteroidota
GTA
Tyr
>WENV181945163
OGZB01002133
99847
Bacteroidota
GTA
Tyr
>WENV181945432
OGZB01007400
399200
Bacteroidota
CAT
Met
>WENV181944940
OGZB01000579
488746
Bacteroidota
CTG
Gln
>WENV181945557
OGZB01016042
280478
Bacteroidota
GCC
Gly
>WENV181944977
OGZB01000774
175844
Bacteroidota
GGC
Ala
>WENV181945598
OGZB01020342
73011
Bacteroidota
CAA
Leu
>WENV181945229
OGZB01003032
398828
Bacteroidota
CCG
Arg
>WENV181945174
OGZB01002271
74084
Bacteroidota
CAG
Leu
>WENV181945634
OGZB01027806
480325
Bacteroidota
CTG
Gln
>WENV181945340
OGZB01004642
176192
Bacteroidota
TCT
Arg
>WENV181945590
OGZB01019791
69204
Bacteroidota
TGA
Ser
>WENV181945143
OGZB01001952
280446
Bacteroidota
TTT
Lys
>WENV181945012
OGZB01000993
280446
Bacteroidota
TTT
Lys
>WENV181944983
OGZB01000798
280446
Bacteroidota
TTT
Lys
>WENV181944980
OGZB01000791
280446
Bacteroidota
TTT
Lys
>WENV181945086
OGZB01001480
484496
Bacteroidota
TTG
Gln
>WENV181945061
OGZB01001282
484496
Bacteroidota
TTG
Gln
>WENV181944858
OGZB01000252
484496
Bacteroidota
TTG
Gln
>WENV181945276
OGZB01003629
27502
Bacteroidota
GGA
Ser
>WENV181945109
OGZB01001733
27502
Bacteroidota
GGA
Ser
>WENV181945069
OGZB01001341
27502
Bacteroidota
GGA
Ser
>WENV181945355
OGZB01005138
365112
Bacteroidota
TTT
Lys
>WENV181945076
OGZB01001382
365112
Bacteroidota
TTT
Lys
>WENV181944990
OGZB01000833
365112
Bacteroidota
TTT
Lys
>WENV181944981
OGZB01000795
365112
Bacteroidota
TTT
Lys
>WENV181944968
OGZB01000689
365112
Bacteroidota
TTT
Lys
>WENV181945286
OGZB01003764
398836
Bacteroidota
GCA
Cys
>WENV181944806
OGZB01000105
398836
Bacteroidota
GCA
Cys
>WENV181944805
OGZB01000105
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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