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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181963916
OGZQ01001336
117741
Bacteroidota
TAG
Leu
>WENV181963930
OGZQ01001507
398829
Bacteroidota
CCT
Arg
>WENV181963641
OGZQ01000043
404226
Bacteroidota
CCT
Arg
>WENV181963985
OGZQ01002886
175904
Bacteroidota
CGG
Pro
>WENV181963573
OGZQ01000006
280553
Bacteroidota
TTT
Lys
>WENV181963646
OGZQ01000046
280553
Bacteroidota
TTT
Lys
>WENV181963816
OGZQ01000506
280557
Bacteroidota
CAT
Met
>WENV181963740
OGZQ01000251
398871
Bacteroidota
TTC
Glu
>WENV181963959
OGZQ01002125
201819
Bacteroidota
CAT
Met
>WENV181963984
OGZQ01002858
56493
Bacteroidota
TGA
Ser
>WENV181963627
OGZQ01000032
175906
Bacteroidota
GTG
His
>WENV181963976
OGZQ01002625
175903
Bacteroidota
GTG
His
>WENV181963676
OGZQ01000112
118089
Bacteroidota
TAG
Leu
>WENV181963986
OGZQ01002886
280530
Bacteroidota
CCA
Trp
>WENV181963830
OGZQ01000622
280530
Bacteroidota
CCA
Trp
>WENV181963820
OGZQ01000526
175936
Bacteroidota
CAT
Met
>WENV181963631
OGZQ01000035
178907
Bacteroidota
TCT
Arg
>WENV181963691
OGZQ01000149
20449
Bacteroidota
GGA
Ser
>WENV181963824
OGZQ01000559
56072
Bacteroidota
TAA
Leu
>WENV181963977
OGZQ01002636
175902
Bacteroidota
GGC
Ala
>WENV181963791
OGZQ01000408
480404
Bacteroidota
TTG
Gln
>WENV181963873
OGZQ01000817
280451
Bacteroidota
CGT
Thr
>WENV181963979
OGZQ01002700
99847
Bacteroidota
GTA
Tyr
>WENV181963868
OGZQ01000776
99847
Bacteroidota
GTA
Tyr
>WENV181963656
OGZQ01000079
399200
Bacteroidota
CAT
Met
>WENV181963580
OGZQ01000009
399200
Bacteroidota
CAT
Met
>WENV181963835
OGZQ01000631
332896
Bacteroidota
TTT
Lys
>WENV181963832
OGZQ01000624
332896
Bacteroidota
TTT
Lys
>WENV181963804
OGZQ01000476
332896
Bacteroidota
TTT
Lys
>WENV181963928
OGZQ01001453
488746
Bacteroidota
CTG
Gln
>WENV181963721
OGZQ01000202
399026
Bacteroidota
CCT
Arg
>WENV181963714
OGZQ01000190
280478
Bacteroidota
GCC
Gly
>WENV181963911
OGZQ01001210
175844
Bacteroidota
GGC
Ala
>WENV181963987
OGZQ01002936
280532
Bacteroidota
>WENV181963760
OGZQ01000304
229246
Bacteroidota
GGC
Ala
>WENV181963730
OGZQ01000224
73011
Bacteroidota
CAA
Leu
>WENV181963724
OGZQ01000216
480318
Bacteroidota
CTG
Gln
>WENV181963680
OGZQ01000129
158068
Bacteroidota
GGG
Pro
>WENV181964065
OGZQ01005760
398828
Bacteroidota
CCG
Arg
>WENV181963690
OGZQ01000149
74084
Bacteroidota
CAG
Leu
>WENV181963574
OGZQ01000007
480325
Bacteroidota
CTG
Gln
>WENV181963909
OGZQ01001179
140771
Bacteroidota
>WENV181963842
OGZQ01000657
176192
Bacteroidota
TCT
Arg
>WENV181963818
OGZQ01000515
280446
Bacteroidota
TTT
Lys
>WENV181963762
OGZQ01000310
280446
Bacteroidota
TTT
Lys
>WENV181963995
OGZQ01003277
484496
Bacteroidota
TTG
Gln
>WENV181963672
OGZQ01000107
285750
Bacteroidota
CCC
Gly
>WENV181963720
OGZQ01000199
117804
Bacteroidota
TAG
Leu
>WENV181963871
OGZQ01000785
398836
Bacteroidota
GCA
Cys
>WENV181963844
OGZQ01000667
398836
Bacteroidota
GCA
Cys
>WENV181963749
OGZQ01000278
398836
Bacteroidota
GCA
Cys
>WENV181963725
OGZQ01000218
398836
Bacteroidota
GCA
Cys
>WENV181963689
OGZQ01000148
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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