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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181966402
OGZU01014335
280500
Bacillota
TGC
Ala
>WENV181966254
OGZU01001977
349107
Bacillota
GCC
Gly
>WENV181966324
OGZU01005611
405363
Bacillota
GCA
Cys
>WENV181966213
OGZU01000998
290391
Bacillota
TAC
Val
>WENV181966253
OGZU01001977
280428
Bacillota
GAA
Phe
>WENV181966328
OGZU01005659
176678
Bacillota
GTC
Asp
>WENV181966153
OGZU01000152
175842
Bacillota
CAC
Val
>WENV181966409
OGZU01015422
282752
Bacillota
TTT
Lys
>WENV181966359
OGZU01008894
295166
Bacillota
TGC
Ala
>WENV181966270
OGZU01002495
190476
Bacillota
CAT
Met
>WENV181966181
OGZU01000402
280447
Bacillota
GAC
Val
>WENV181966193
OGZU01000580
5692
Bacillota
GCT
Ser
>WENV181966231
OGZU01001404
73009
Bacillota
CAG
Leu
>WENV181966180
OGZU01000395
291581
Bacillota
CGG
Pro
>WENV181966248
OGZU01001847
175859
Bacillota
TCT
Arg
>WENV181966235
OGZU01001552
175831
Bacillota
ACG
Arg
>WENV181966370
OGZU01010039
480905
Bacillota
TCC
Gly
>WENV181966215
OGZU01001006
346451
Bacillota
TTT
Lys
>WENV181966179
OGZU01000395
480322
Bacillota
CTG
Gln
>WENV181966257
OGZU01002120
175868
Bacillota
GTT
Asn
>WENV181966320
OGZU01005395
322848
Bacillota
CTT
Lys
>WENV181966256
OGZU01002120
398854
Bacillota
CTC
Glu
>WENV181966425
OGZU01017908
291576
Bacillota
CCC
Gly
>WENV181966234
OGZU01001543
480324
Bacillota
TTG
Gln
>WENV181966282
OGZU01003028
497729
Bacillota
CCA
Trp
>WENV181966354
OGZU01008643
175899
Bacillota
GTC
Asp
>WENV181966387
OGZU01011880
398857
Bacillota
TTC
Glu
>WENV181966247
OGZU01001775
280444
Bacillota
GGT
Thr
>WENV181966331
OGZU01005803
179755
Bacillota
CCG
Arg
>WENV181966271
OGZU01002495
398832
Bacillota
TTC
Glu
>WENV181966329
OGZU01005659
449573
Bacillota
>WENV181966468
OGZU01030502
118669
Bacillota
GTA
Tyr
>WENV181966357
OGZU01008643
118669
Bacillota
GTA
Tyr
>WENV181966276
OGZU01002784
118669
Bacillota
GTA
Tyr
>WENV181966280
OGZU01002964
282755
Bacillota
GGT
Thr
>WENV181966374
OGZU01010466
280476
Bacillota
TTT
Lys
>WENV181966423
OGZU01017583
398852
Bacillota
CTC
Glu
>WENV181966305
OGZU01004123
289123
Bacillota
GGT
Thr
>WENV181966470
OGZU01030722
398833
Bacillota
TGT
Thr
>WENV181966437
OGZU01020004
175849
Bacillota
GTC
Asp
>WENV181966369
OGZU01010039
328987
Bacillota
TGG
Pro
>WENV181966192
OGZU01000580
56074
Bacillota
TGA
Ser
>WENV181966296
OGZU01003586
280473
Bacillota
TGG
Pro
>WENV181966268
OGZU01002468
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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