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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181968169
OGZW01000599
295385
Bacteroidota
CCA
Trp
>WENV181968685
OGZW01005125
285360
Bacteroidota
TTT
Lys
>WENV181968764
OGZW01006729
285360
Bacteroidota
TTT
Lys
>WENV181968859
OGZW01008288
117741
Bacteroidota
TAG
Leu
>WENV181969063
OGZW01014659
398829
Bacteroidota
CCT
Arg
>WENV181969362
OGZW01042672
398829
Bacteroidota
CCT
Arg
>WENV181968806
OGZW01007394
175838
Bacteroidota
GTT
Asn
>WENV181968807
OGZW01007394
175838
Bacteroidota
GTT
Asn
>WENV181969508
OGZW01083654
404226
Bacteroidota
CCT
Arg
>WENV181968547
OGZW01003290
175904
Bacteroidota
CGG
Pro
>WENV181969300
OGZW01032765
289031
Bacteroidota
CAT
Met
>WENV181968915
OGZW01009881
280557
Bacteroidota
CAT
Met
>WENV181968706
OGZW01005533
280557
Bacteroidota
CAT
Met
>WENV181969338
OGZW01038490
20206
Bacteroidota
GGA
Ser
>WENV181968176
OGZW01000623
483416
Bacteroidota
CTG
Gln
>WENV181968747
OGZW01006304
56493
Bacteroidota
TGA
Ser
>WENV181968274
OGZW01001192
56493
Bacteroidota
TGA
Ser
>WENV181968700
OGZW01005437
175903
Bacteroidota
GTG
His
>WENV181968048
OGZW01000184
118089
Bacteroidota
TAG
Leu
>WENV181968906
OGZW01009539
182267
Bacteroidota
GTT
Asn
>WENV181968567
OGZW01003417
20449
Bacteroidota
GGA
Ser
>WENV181968316
OGZW01001483
56072
Bacteroidota
TAA
Leu
>WENV181968515
OGZW01002918
57807
Bacteroidota
TGA
Ser
>WENV181968489
OGZW01002755
57807
Bacteroidota
TGA
Ser
>WENV181968482
OGZW01002588
57807
Bacteroidota
TGA
Ser
>WENV181968077
OGZW01000294
57807
Bacteroidota
TGA
Ser
>WENV181968974
OGZW01011453
175902
Bacteroidota
GGC
Ala
>WENV181969488
OGZW01077634
179697
Bacteroidota
TGT
Thr
>WENV181969171
OGZW01021209
398860
Bacteroidota
CTC
Glu
>WENV181968193
OGZW01000753
280451
Bacteroidota
CGT
Thr
>WENV181968945
OGZW01010638
99847
Bacteroidota
GTA
Tyr
>WENV181968878
OGZW01008870
399200
Bacteroidota
CAT
Met
>WENV181968763
OGZW01006713
186874
Bacteroidota
CAT
Met
>WENV181968453
OGZW01002386
178179
Bacteroidota
GGC
Ala
>WENV181969271
OGZW01029341
488746
Bacteroidota
CTG
Gln
>WENV181968175
OGZW01000622
280478
Bacteroidota
GCC
Gly
>WENV181968975
OGZW01011515
20766
Bacteroidota
GGA
Ser
>WENV181968449
OGZW01002339
175844
Bacteroidota
GGC
Ala
>WENV181968307
OGZW01001384
175844
Bacteroidota
GGC
Ala
>WENV181969253
OGZW01026546
280515
Bacteroidota
CCA
Trp
>WENV181968590
OGZW01003771
158068
Bacteroidota
GGG
Pro
>WENV181968070
OGZW01000281
158068
Bacteroidota
GGG
Pro
>WENV181968895
OGZW01009067
398828
Bacteroidota
CCG
Arg
>WENV181968034
OGZW01000152
159415
Bacteroidota
TAC
Val
>WENV181968033
OGZW01000152
159415
Bacteroidota
TAC
Val
>WENV181968962
OGZW01011277
140771
Bacteroidota
>WENV181969475
OGZW01072277
176192
Bacteroidota
TCT
Arg
>WENV181968311
OGZW01001460
176192
Bacteroidota
TCT
Arg
>WENV181969229
OGZW01023645
484496
Bacteroidota
TTG
Gln
>WENV181968853
OGZW01008248
484496
Bacteroidota
TTG
Gln
>WENV181968487
OGZW01002679
484496
Bacteroidota
TTG
Gln
>WENV181968135
OGZW01000466
285750
Bacteroidota
CCC
Gly
>WENV181968894
OGZW01009057
398836
Bacteroidota
GCA
Cys
>WENV181968756
OGZW01006520
398836
Bacteroidota
GCA
Cys
>WENV181968473
OGZW01002511
398836
Bacteroidota
GCA
Cys
>WENV181968158
OGZW01000552
398836
Bacteroidota
GCA
Cys
>WENV181968143
OGZW01000483
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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