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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181969899
OGZX01000905
179231
Actinomycetota
TAC
Val
>WENV181969638
OGZX01000141
176499
Actinomycetota
CAT
Met
>WENV181970563
OGZX01019949
147806
Actinomycetota
TAA
Leu
>WENV181969700
OGZX01000266
280498
Actinomycetota
GTT
Asn
>WENV181969706
OGZX01000299
280498
Actinomycetota
GTT
Asn
>WENV181969707
OGZX01000299
280498
Actinomycetota
GTT
Asn
>WENV181970564
OGZX01020115
56083
Actinomycetota
CGA
Ser
>WENV181970046
OGZX01001648
140768
Actinomycetota
TAG
Leu
>WENV181970318
OGZX01005414
59689
Actinomycetota
GGA
Ser
>WENV181969962
OGZX01001170
175837
Actinomycetota
ACG
Arg
>WENV181970398
OGZX01007573
29393
Actinomycetota
GCT
Ser
>WENV181969836
OGZX01000690
280441
Actinomycetota
CCG
Arg
>WENV181970708
OGZX01051898
280702
Actinomycetota
GGC
Ala
>WENV181970500
OGZX01013080
176077
Actinomycetota
CAT
Met
>WENV181970099
OGZX01001926
176638
Actinomycetota
GGG
Pro
>WENV181970131
OGZX01002242
280524
Actinomycetota
TGC
Ala
>WENV181970132
OGZX01002242
280523
Actinomycetota
GGC
Ala
>WENV181969699
OGZX01000266
280523
Actinomycetota
GGC
Ala
>WENV181970611
OGZX01027360
176555
Actinomycetota
CAT
Met
>WENV181969806
OGZX01000571
175841
Actinomycetota
TAT
Ile
>WENV181969731
OGZX01000369
175872
Actinomycetota
GTC
Asp
>WENV181969730
OGZX01000369
175872
Actinomycetota
GTC
Asp
>WENV181970615
OGZX01028354
280703
Actinomycetota
CCT
Arg
>WENV181969635
OGZX01000141
20205
Actinomycetota
GCT
Ser
>WENV181970028
OGZX01001571
280450
Actinomycetota
TTT
Lys
>WENV181969655
OGZX01000167
480329
Actinomycetota
CCC
Gly
>WENV181969759
OGZX01000436
175882
Actinomycetota
TGG
Pro
>WENV181969898
OGZX01000895
20209
Actinomycetota
GAG
Leu
>WENV181969698
OGZX01000266
480319
Actinomycetota
TTG
Gln
>WENV181970344
OGZX01006323
280489
Actinomycetota
CTC
Glu
>WENV181969948
OGZX01001105
280499
Actinomycetota
CCT
Arg
>WENV181970345
OGZX01006323
398853
Actinomycetota
CTG
Gln
>WENV181970716
OGZX01056847
176642
Actinomycetota
CAA
Leu
>WENV181970534
OGZX01017024
175843
Actinomycetota
CAA
Leu
>WENV181970428
OGZX01008188
203883
Actinomycetota
TCT
Arg
>WENV181970258
OGZX01003658
46642
Actinomycetota
CGA
Ser
>WENV181969654
OGZX01000167
104211
Actinomycetota
CAG
Leu
>WENV181969637
OGZX01000141
117903
Actinomycetota
GTA
Tyr
>WENV181969728
OGZX01000369
56071
Actinomycetota
TGA
Ser
>WENV181969627
OGZX01000120
147796
Actinomycetota
TAA
Leu
>WENV181970045
OGZX01001648
280470
Actinomycetota
CGT
Thr
>WENV181970672
OGZX01040503
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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