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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181972389
OHAA01000004
179231
Actinomycetota
TAC
Val
>WENV181972543
OHAA01000535
176499
Actinomycetota
CAT
Met
>WENV181973154
OHAA01013772
175907
Actinomycetota
TAC
Val
>WENV181972400
OHAA01000011
147806
Actinomycetota
TAA
Leu
>WENV181972453
OHAA01000081
280498
Actinomycetota
GTT
Asn
>WENV181972926
OHAA01005094
56083
Actinomycetota
CGA
Ser
>WENV181972463
OHAA01000112
140768
Actinomycetota
TAG
Leu
>WENV181973184
OHAA01015749
176075
Actinomycetota
TCT
Arg
>WENV181973281
OHAA01023432
175848
Actinomycetota
TGG
Pro
>WENV181972528
OHAA01000443
482604
Actinomycetota
TTG
Gln
>WENV181972392
OHAA01000007
175837
Actinomycetota
ACG
Arg
>WENV181972391
OHAA01000007
175837
Actinomycetota
ACG
Arg
>WENV181973137
OHAA01012914
29393
Actinomycetota
GCT
Ser
>WENV181973265
OHAA01022277
280549
Actinomycetota
CAC
Val
>WENV181973320
OHAA01026699
21508
Actinomycetota
GAG
Leu
>WENV181972455
OHAA01000086
176638
Actinomycetota
GGG
Pro
>WENV181972629
OHAA01001233
280524
Actinomycetota
TGC
Ala
>WENV181972399
OHAA01000010
176723
Actinomycetota
TCT
Arg
>WENV181973432
OHAA01045439
117777
Actinomycetota
>WENV181972784
OHAA01002909
280523
Actinomycetota
GGC
Ala
>WENV181972388
OHAA01000003
176555
Actinomycetota
CAT
Met
>WENV181973068
OHAA01009898
280496
Actinomycetota
CGT
Thr
>WENV181973448
OHAA01049005
280703
Actinomycetota
CCT
Arg
>WENV181972408
OHAA01000017
280450
Actinomycetota
TTT
Lys
>WENV181972449
OHAA01000067
56166
Actinomycetota
TGA
Ser
>WENV181972552
OHAA01000623
358727
Actinomycetota
CCG
Arg
>WENV181972509
OHAA01000310
480329
Actinomycetota
CCC
Gly
>WENV181972402
OHAA01000011
175882
Actinomycetota
TGG
Pro
>WENV181973089
OHAA01010696
222475
Actinomycetota
CTT
Lys
>WENV181972414
OHAA01000028
280489
Actinomycetota
CTC
Glu
>WENV181972437
OHAA01000058
280499
Actinomycetota
CCT
Arg
>WENV181972905
OHAA01004800
398853
Actinomycetota
CTG
Gln
>WENV181972415
OHAA01000028
398853
Actinomycetota
CTG
Gln
>WENV181972401
OHAA01000011
176642
Actinomycetota
CAA
Leu
>WENV181972448
OHAA01000067
46642
Actinomycetota
CGA
Ser
>WENV181972467
OHAA01000120
117903
Actinomycetota
GTA
Tyr
>WENV181972462
OHAA01000112
280470
Actinomycetota
CGT
Thr
>WENV181973069
OHAA01009909
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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