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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181979792
OHAF01003101
200563
Bacillota
TGG
Pro
>WENV181980307
OHAF01017912
212982
Bacillota
ACG
Arg
>WENV181979729
OHAF01002682
343590
Bacillota
GCC
Gly
>WENV181980688
OHAF01106326
343590
Bacillota
GCC
Gly
>WENV181979288
OHAF01000711
349107
Bacillota
GCC
Gly
>WENV181980587
OHAF01062053
280428
Bacillota
GAA
Phe
>WENV181980430
OHAF01029677
291579
Bacillota
GAA
Phe
>WENV181979289
OHAF01000711
280466
Bacillota
TAC
Val
>WENV181980076
OHAF01007528
175842
Bacillota
CAC
Val
>WENV181980255
OHAF01015033
184497
Bacillota
GGG
Pro
>WENV181979623
OHAF01001978
459011
Bacillota
TGT
Thr
>WENV181979938
OHAF01004772
179176
Bacillota
ACG
Arg
>WENV181979539
OHAF01001472
179176
Bacillota
ACG
Arg
>WENV181979565
OHAF01001644
406553
Bacillota
TTG
Gln
>WENV181979536
OHAF01001462
190476
Bacillota
CAT
Met
>WENV181979627
OHAF01001978
176014
Bacillota
TCT
Arg
>WENV181979851
OHAF01003757
73664
Bacillota
CAG
Leu
>WENV181979371
OHAF01000956
73664
Bacillota
CAG
Leu
>WENV181979924
OHAF01004539
280447
Bacillota
GAC
Val
>WENV181979930
OHAF01004617
284723
Bacillota
TAC
Val
>WENV181979823
OHAF01003383
481217
Bacillota
GCA
Cys
>WENV181980497
OHAF01040968
189473
Bacillota
GAT
Ile
>WENV181979974
OHAF01005384
291581
Bacillota
CGG
Pro
>WENV181979782
OHAF01003030
175859
Bacillota
TCT
Arg
>WENV181979472
OHAF01001285
21311
Bacillota
GCT
Ser
>WENV181980294
OHAF01017493
175831
Bacillota
ACG
Arg
>WENV181980614
OHAF01070906
353153
Bacillota
TGC
Ala
>WENV181978933
OHAF01000115
284627
Bacillota
GAA
Phe
>WENV181979622
OHAF01001978
195133
Bacillota
GTC
Asp
>WENV181980174
OHAF01010632
294020
Bacillota
TAC
Val
>WENV181980408
OHAF01028852
27216
Bacillota
GCT
Ser
>WENV181979954
OHAF01005039
480322
Bacillota
CTG
Gln
>WENV181980016
OHAF01006332
401685
Bacillota
TTG
Gln
>WENV181979706
OHAF01002437
175868
Bacillota
GTT
Asn
>WENV181980305
OHAF01017912
455891
Bacillota
GCC
Gly
>WENV181979705
OHAF01002437
398854
Bacillota
CTC
Glu
>WENV181980384
OHAF01025952
291576
Bacillota
CCC
Gly
>WENV181979802
OHAF01003171
480324
Bacillota
TTG
Gln
>WENV181979413
OHAF01001050
497729
Bacillota
CCA
Trp
>WENV181979649
OHAF01002092
303718
Bacillota
TGT
Thr
>WENV181979574
OHAF01001731
303718
Bacillota
TGT
Thr
>WENV181979505
OHAF01001380
303718
Bacillota
TGT
Thr
>WENV181979407
OHAF01001045
303718
Bacillota
TGT
Thr
>WENV181979300
OHAF01000746
303718
Bacillota
TGT
Thr
>WENV181979196
OHAF01000507
323864
Bacillota
TGC
Ala
>WENV181979040
OHAF01000210
301649
Bacillota
TTT
Lys
>WENV181980045
OHAF01006916
398857
Bacillota
TTC
Glu
>WENV181979056
OHAF01000236
204381
Bacillota
GAT
Ile
>WENV181979836
OHAF01003528
280444
Bacillota
GGT
Thr
>WENV181979430
OHAF01001118
483485
Bacillota
CCC
Gly
>WENV181979534
OHAF01001456
223045
Bacillota
GAT
Ile
>WENV181979990
OHAF01005616
179755
Bacillota
CCG
Arg
>WENV181979537
OHAF01001462
398832
Bacillota
TTC
Glu
>WENV181979965
OHAF01005223
25955
Bacillota
GCT
Ser
>WENV181979228
OHAF01000594
118669
Bacillota
GTA
Tyr
>WENV181979176
OHAF01000481
118669
Bacillota
GTA
Tyr
>WENV181980003
OHAF01005927
52748
Bacillota
TGA
Ser
>WENV181980438
OHAF01031111
280476
Bacillota
TTT
Lys
>WENV181979681
OHAF01002281
398852
Bacillota
CTC
Glu
>WENV181979680
OHAF01002281
398852
Bacillota
CTC
Glu
>WENV181979944
OHAF01004890
141141
Bacillota
GTA
Tyr
>WENV181980573
OHAF01058631
201856
Bacillota
GAT
Ile
>WENV181979326
OHAF01000813
280483
Bacillota
GAA
Phe
>WENV181978816
OHAF01000002
298260
Bacillota
GTT
Asn
>WENV181979217
OHAF01000558
285601
Bacillota
TTC
Glu
>WENV181979216
OHAF01000558
285601
Bacillota
TTC
Glu
>WENV181979375
OHAF01000957
175857
Bacillota
GTG
His
>WENV181979327
OHAF01000813
285756
Bacillota
GCC
Gly
>WENV181980328
OHAF01019579
398833
Bacillota
TGT
Thr
>WENV181979835
OHAF01003528
175849
Bacillota
GTC
Asp
>WENV181980027
OHAF01006633
179166
Bacillota
TCT
Arg
>WENV181980153
OHAF01009769
178610
Bacillota
GTT
Asn
>WENV181979883
OHAF01004149
56074
Bacillota
TGA
Ser
>WENV181979720
OHAF01002582
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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