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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181983642
OHAI01000289
176499
Actinomycetota
CAT
Met
>WENV181984270
OHAI01006941
175883
Actinomycetota
GAT
Ile
>WENV181983604
OHAI01000199
175907
Actinomycetota
TAC
Val
>WENV181983763
OHAI01000749
147806
Actinomycetota
TAA
Leu
>WENV181984211
OHAI01005730
295964
Actinomycetota
GTT
Asn
>WENV181983521
OHAI01000026
459899
Actinomycetota
TTC
Glu
>WENV181983519
OHAI01000026
56083
Actinomycetota
CGA
Ser
>WENV181983814
OHAI01000953
140768
Actinomycetota
TAG
Leu
>WENV181983691
OHAI01000434
140768
Actinomycetota
TAG
Leu
>WENV181983980
OHAI01002290
176075
Actinomycetota
TCT
Arg
>WENV181984029
OHAI01002786
175848
Actinomycetota
TGG
Pro
>WENV181983797
OHAI01000894
20208
Actinomycetota
GAG
Leu
>WENV181984003
OHAI01002522
175837
Actinomycetota
ACG
Arg
>WENV181983970
OHAI01002166
29393
Actinomycetota
GCT
Ser
>WENV181984421
OHAI01012056
280549
Actinomycetota
CAC
Val
>WENV181983741
OHAI01000591
349164
Actinomycetota
CTC
Glu
>WENV181983770
OHAI01000775
280702
Actinomycetota
GGC
Ala
>WENV181984035
OHAI01002921
176077
Actinomycetota
CAT
Met
>WENV181984124
OHAI01004297
241064
Actinomycetota
CTC
Glu
>WENV181983582
OHAI01000145
176638
Actinomycetota
GGG
Pro
>WENV181983772
OHAI01000780
280524
Actinomycetota
TGC
Ala
>WENV181984534
OHAI01018593
291585
Actinomycetota
GCC
Gly
>WENV181984305
OHAI01007772
150272
Actinomycetota
TAA
Leu
>WENV181983740
OHAI01000591
117777
Actinomycetota
>WENV181983861
OHAI01001382
280523
Actinomycetota
GGC
Ala
>WENV181983969
OHAI01002166
175949
Actinomycetota
CAT
Met
>WENV181983527
OHAI01000034
176555
Actinomycetota
CAT
Met
>WENV181983583
OHAI01000149
191955
Actinomycetota
TGT
Thr
>WENV181984041
OHAI01002972
280544
Actinomycetota
GTG
His
>WENV181984325
OHAI01008407
280536
Actinomycetota
CTT
Lys
>WENV181983692
OHAI01000434
280496
Actinomycetota
CGT
Thr
>WENV181983603
OHAI01000193
280703
Actinomycetota
CCT
Arg
>WENV181984326
OHAI01008426
175926
Actinomycetota
CAT
Met
>WENV181983517
OHAI01000020
280450
Actinomycetota
TTT
Lys
>WENV181983690
OHAI01000434
323758
Actinomycetota
CGT
Thr
>WENV181983646
OHAI01000301
56166
Actinomycetota
TGA
Ser
>WENV181983874
OHAI01001484
358727
Actinomycetota
CCG
Arg
>WENV181983610
OHAI01000227
358727
Actinomycetota
CCG
Arg
>WENV181983637
OHAI01000275
480329
Actinomycetota
CCC
Gly
>WENV181984123
OHAI01004297
483206
Actinomycetota
CTG
Gln
>WENV181983607
OHAI01000211
175882
Actinomycetota
TGG
Pro
>WENV181983895
OHAI01001648
99865
Actinomycetota
CAG
Leu
>WENV181983846
OHAI01001234
222475
Actinomycetota
CTT
Lys
>WENV181983641
OHAI01000286
480319
Actinomycetota
TTG
Gln
>WENV181983613
OHAI01000235
280499
Actinomycetota
CCT
Arg
>WENV181983545
OHAI01000073
398853
Actinomycetota
CTG
Gln
>WENV181983742
OHAI01000591
398853
Actinomycetota
CTG
Gln
>WENV181983937
OHAI01001837
176642
Actinomycetota
CAA
Leu
>WENV181984422
OHAI01012105
175843
Actinomycetota
CAA
Leu
>WENV181983528
OHAI01000041
237585
Actinomycetota
TAC
Val
>WENV181983892
OHAI01001631
203883
Actinomycetota
TCT
Arg
>WENV181983520
OHAI01000026
56075
Actinomycetota
TGA
Ser
>WENV181984017
OHAI01002656
46642
Actinomycetota
CGA
Ser
>WENV181983636
OHAI01000275
104211
Actinomycetota
CAG
Leu
>WENV181983645
OHAI01000299
117903
Actinomycetota
GTA
Tyr
>WENV181983769
OHAI01000775
506175
Actinomycetota
TTG
Gln
>WENV181983813
OHAI01000953
280470
Actinomycetota
CGT
Thr
>WENV181984070
OHAI01003362
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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