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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181990198
OHAP01001179
179231
Actinomycetota
TAC
Val
>WENV181990450
OHAP01004275
179231
Actinomycetota
TAC
Val
>WENV181990322
OHAP01002402
175883
Actinomycetota
GAT
Ile
>WENV181989934
OHAP01000072
175907
Actinomycetota
TAC
Val
>WENV181990489
OHAP01004965
147806
Actinomycetota
TAA
Leu
>WENV181989945
OHAP01000097
280498
Actinomycetota
GTT
Asn
>WENV181990007
OHAP01000197
280498
Actinomycetota
GTT
Asn
>WENV181990077
OHAP01000437
280498
Actinomycetota
GTT
Asn
>WENV181990078
OHAP01000437
280498
Actinomycetota
GTT
Asn
>WENV181990383
OHAP01003033
280498
Actinomycetota
GTT
Asn
>WENV181990384
OHAP01003033
280498
Actinomycetota
GTT
Asn
>WENV181990378
OHAP01002983
280503
Actinomycetota
CCT
Arg
>WENV181989946
OHAP01000098
295964
Actinomycetota
GTT
Asn
>WENV181990119
OHAP01000667
56083
Actinomycetota
CGA
Ser
>WENV181990642
OHAP01007987
140768
Actinomycetota
TAG
Leu
>WENV181990338
OHAP01002526
140768
Actinomycetota
TAG
Leu
>WENV181990090
OHAP01000511
140768
Actinomycetota
TAG
Leu
>WENV181989982
OHAP01000164
176075
Actinomycetota
TCT
Arg
>WENV181990027
OHAP01000278
176078
Actinomycetota
GGG
Pro
>WENV181990098
OHAP01000523
482604
Actinomycetota
TTG
Gln
>WENV181989927
OHAP01000050
59689
Actinomycetota
GGA
Ser
>WENV181990347
OHAP01002635
175837
Actinomycetota
ACG
Arg
>WENV181990346
OHAP01002635
175837
Actinomycetota
ACG
Arg
>WENV181990036
OHAP01000298
175837
Actinomycetota
ACG
Arg
>WENV181990035
OHAP01000298
175837
Actinomycetota
ACG
Arg
>WENV181990640
OHAP01007920
46681
Actinomycetota
CGA
Ser
>WENV181990182
OHAP01001094
29393
Actinomycetota
GCT
Ser
>WENV181989916
OHAP01000047
280549
Actinomycetota
CAC
Val
>WENV181990138
OHAP01000763
187349
Actinomycetota
TGG
Pro
>WENV181989940
OHAP01000088
398947
Actinomycetota
CCA
Trp
>WENV181990257
OHAP01001578
280441
Actinomycetota
CCG
Arg
>WENV181990099
OHAP01000523
280702
Actinomycetota
GGC
Ala
>WENV181990358
OHAP01002739
398843
Actinomycetota
GTT
Asn
>WENV181990357
OHAP01002739
398843
Actinomycetota
GTT
Asn
>WENV181989898
OHAP01000028
176077
Actinomycetota
CAT
Met
>WENV181990038
OHAP01000307
298224
Actinomycetota
GGC
Ala
>WENV181989911
OHAP01000043
21508
Actinomycetota
GAG
Leu
>WENV181990649
OHAP01008229
176638
Actinomycetota
GGG
Pro
>WENV181990359
OHAP01002746
176638
Actinomycetota
GGG
Pro
>WENV181990295
OHAP01002034
176638
Actinomycetota
GGG
Pro
>WENV181990417
OHAP01003803
280524
Actinomycetota
TGC
Ala
>WENV181990123
OHAP01000720
398948
Actinomycetota
TTC
Glu
>WENV181990396
OHAP01003298
176723
Actinomycetota
TCT
Arg
>WENV181990528
OHAP01005296
480374
Actinomycetota
TTG
Gln
>WENV181990711
OHAP01010517
291585
Actinomycetota
GCC
Gly
>WENV181990389
OHAP01003192
150272
Actinomycetota
TAA
Leu
>WENV181990105
OHAP01000554
117777
Actinomycetota
>WENV181990751
OHAP01013501
280523
Actinomycetota
GGC
Ala
>WENV181990418
OHAP01003803
280523
Actinomycetota
GGC
Ala
>WENV181990343
OHAP01002602
280523
Actinomycetota
GGC
Ala
>WENV181990106
OHAP01000554
175949
Actinomycetota
CAT
Met
>WENV181989915
OHAP01000047
418252
Actinomycetota
GAC
Val
>WENV181989985
OHAP01000171
191955
Actinomycetota
TGT
Thr
>WENV181990026
OHAP01000261
175841
Actinomycetota
TAT
Ile
>WENV181990326
OHAP01002450
280544
Actinomycetota
GTG
His
>WENV181990284
OHAP01001850
280536
Actinomycetota
CTT
Lys
>WENV181990339
OHAP01002526
280496
Actinomycetota
CGT
Thr
>WENV181990377
OHAP01002981
175872
Actinomycetota
GTC
Asp
>WENV181990010
OHAP01000204
280703
Actinomycetota
CCT
Arg
>WENV181990397
OHAP01003304
280450
Actinomycetota
TTT
Lys
>WENV181990029
OHAP01000286
280450
Actinomycetota
TTT
Lys
>WENV181989926
OHAP01000050
280450
Actinomycetota
TTT
Lys
>WENV181990337
OHAP01002526
323758
Actinomycetota
CGT
Thr
>WENV181990720
OHAP01011334
56166
Actinomycetota
TGA
Ser
>WENV181990310
OHAP01002314
480329
Actinomycetota
CCC
Gly
>WENV181990313
OHAP01002346
483206
Actinomycetota
CTG
Gln
>WENV181990278
OHAP01001801
483206
Actinomycetota
CTG
Gln
>WENV181990428
OHAP01003971
175882
Actinomycetota
TGG
Pro
>WENV181990025
OHAP01000253
99865
Actinomycetota
CAG
Leu
>WENV181990108
OHAP01000583
222475
Actinomycetota
CTT
Lys
>WENV181990597
OHAP01006562
480319
Actinomycetota
TTG
Gln
>WENV181990150
OHAP01000848
480319
Actinomycetota
TTG
Gln
>WENV181990060
OHAP01000374
280489
Actinomycetota
CTC
Glu
>WENV181990466
OHAP01004626
280489
Actinomycetota
CTC
Glu
>WENV181990938
OHAP01052324
280499
Actinomycetota
CCT
Arg
>WENV181990467
OHAP01004626
398853
Actinomycetota
CTG
Gln
>WENV181990061
OHAP01000374
398853
Actinomycetota
CTG
Gln
>WENV181989925
OHAP01000050
398853
Actinomycetota
CTG
Gln
>WENV181990709
OHAP01010321
176642
Actinomycetota
CAA
Leu
>WENV181990137
OHAP01000763
175843
Actinomycetota
CAA
Leu
>WENV181989979
OHAP01000145
175843
Actinomycetota
CAA
Leu
>WENV181989899
OHAP01000028
203883
Actinomycetota
TCT
Arg
>WENV181990064
OHAP01000384
56075
Actinomycetota
TGA
Ser
>WENV181990058
OHAP01000372
46642
Actinomycetota
CGA
Ser
>WENV181990413
OHAP01003676
46642
Actinomycetota
CGA
Ser
>WENV181990501
OHAP01005082
104211
Actinomycetota
CAG
Leu
>WENV181990481
OHAP01004880
104211
Actinomycetota
CAG
Leu
>WENV181990312
OHAP01002331
317680
Actinomycetota
CCG
Arg
>WENV181989913
OHAP01000047
317680
Actinomycetota
CCG
Arg
>WENV181990059
OHAP01000372
56071
Actinomycetota
TGA
Ser
>WENV181990365
OHAP01002799
147796
Actinomycetota
TAA
Leu
>WENV181990089
OHAP01000511
280470
Actinomycetota
CGT
Thr
>WENV181990641
OHAP01007987
280470
Actinomycetota
CGT
Thr
>WENV181990440
OHAP01004193
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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