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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181991850
OHAQ01007880
99852
Bacillota
GTA
Tyr
>WENV181992247
OHAQ01031661
99852
Bacillota
GTA
Tyr
>WENV181991984
OHAQ01011879
405363
Bacillota
GCA
Cys
>WENV181992042
OHAQ01013659
280428
Bacillota
GAA
Phe
>WENV181991029
OHAQ01000139
405357
Bacillota
TTC
Glu
>WENV181991957
OHAQ01010990
291579
Bacillota
GAA
Phe
>WENV181992207
OHAQ01026198
291579
Bacillota
GAA
Phe
>WENV181991756
OHAQ01006029
284746
Bacillota
CTG
Gln
>WENV181991982
OHAQ01011689
175842
Bacillota
CAC
Val
>WENV181991527
OHAQ01003140
175842
Bacillota
CAC
Val
>WENV181990954
OHAQ01000013
323166
Bacillota
TAC
Val
>WENV181990946
OHAQ01000010
176018
Bacillota
CAT
Met
>WENV181991975
OHAQ01011574
179176
Bacillota
ACG
Arg
>WENV181991450
OHAQ01002447
190476
Bacillota
CAT
Met
>WENV181991960
OHAQ01011074
82124
Bacillota
TAA
Leu
>WENV181991658
OHAQ01004395
73664
Bacillota
CAG
Leu
>WENV181992077
OHAQ01015532
280447
Bacillota
GAC
Val
>WENV181991695
OHAQ01005023
280447
Bacillota
GAC
Val
>WENV181992284
OHAQ01035039
186123
Bacillota
GTC
Asp
>WENV181992414
OHAQ01053967
175825
Bacillota
GAT
Ile
>WENV181991914
OHAQ01010029
73009
Bacillota
CAG
Leu
>WENV181992193
OHAQ01024777
481217
Bacillota
GCA
Cys
>WENV181992381
OHAQ01048405
189473
Bacillota
GAT
Ile
>WENV181992180
OHAQ01023457
189473
Bacillota
GAT
Ile
>WENV181992200
OHAQ01025332
291581
Bacillota
CGG
Pro
>WENV181992173
OHAQ01022927
175859
Bacillota
TCT
Arg
>WENV181991073
OHAQ01000235
179810
Bacillota
TCT
Arg
>WENV181992285
OHAQ01035039
291634
Bacillota
GAA
Phe
>WENV181991429
OHAQ01002129
294020
Bacillota
TAC
Val
>WENV181992186
OHAQ01024051
293309
Bacillota
GTT
Asn
>WENV181992505
OHAQ01081202
482449
Bacillota
TCC
Gly
>WENV181992199
OHAQ01025332
480322
Bacillota
CTG
Gln
>WENV181992155
OHAQ01021743
480322
Bacillota
CTG
Gln
>WENV181991846
OHAQ01007800
480322
Bacillota
CTG
Gln
>WENV181991763
OHAQ01006204
187364
Bacillota
CAT
Met
>WENV181992512
OHAQ01083884
175868
Bacillota
GTT
Asn
>WENV181992325
OHAQ01039990
284744
Bacillota
TTT
Lys
>WENV181991780
OHAQ01006482
314834
Bacillota
TGC
Ala
>WENV181992216
OHAQ01027644
291576
Bacillota
CCC
Gly
>WENV181991973
OHAQ01011391
291576
Bacillota
CCC
Gly
>WENV181992004
OHAQ01012494
480324
Bacillota
TTG
Gln
>WENV181992133
OHAQ01020119
400963
Bacillota
GTT
Asn
>WENV181991587
OHAQ01003590
179935
Bacillota
GTC
Asp
>WENV181992475
OHAQ01070847
398857
Bacillota
TTC
Glu
>WENV181992139
OHAQ01020480
280444
Bacillota
GGT
Thr
>WENV181992040
OHAQ01013597
317482
Bacillota
TAC
Val
>WENV181991347
OHAQ01001490
483485
Bacillota
CCC
Gly
>WENV181992043
OHAQ01013659
321753
Bacillota
GCC
Gly
>WENV181991634
OHAQ01004134
179755
Bacillota
CCG
Arg
>WENV181992326
OHAQ01039990
401111
Bacillota
TTC
Glu
>WENV181992427
OHAQ01057030
291650
Bacillota
TGC
Ala
>WENV181992446
OHAQ01061434
46835
Bacillota
TAA
Leu
>WENV181991588
OHAQ01003590
284742
Bacillota
GAA
Phe
>WENV181991451
OHAQ01002447
398832
Bacillota
TTC
Glu
>WENV181991550
OHAQ01003270
406186
Bacillota
CTC
Glu
>WENV181991549
OHAQ01003270
406186
Bacillota
CTC
Glu
>WENV181991515
OHAQ01003022
285756
Bacillota
GCC
Gly
>WENV181991830
OHAQ01007426
398833
Bacillota
TGT
Thr
>WENV181991806
OHAQ01006711
398833
Bacillota
TGT
Thr
>WENV181992128
OHAQ01019731
175849
Bacillota
GTC
Asp
>WENV181992463
OHAQ01069133
280486
Bacillota
TGC
Ala
>WENV181992286
OHAQ01035039
405393
Bacillota
GCC
Gly
>WENV181992037
OHAQ01013549
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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