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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181992650
OHAR01000451
356775
Bacillota
TGT
Thr
>WENV181993050
OHAR01025461
175842
Bacillota
CAC
Val
>WENV181992698
OHAR01000871
348419
Bacillota
GTT
Asn
>WENV181992699
OHAR01000871
348419
Bacillota
GTT
Asn
>WENV181993020
OHAR01019952
295166
Bacillota
TGC
Ala
>WENV181992732
OHAR01001561
190476
Bacillota
CAT
Met
>WENV181992956
OHAR01012166
280447
Bacillota
GAC
Val
>WENV181992971
OHAR01013368
5692
Bacillota
GCT
Ser
>WENV181992807
OHAR01003323
175825
Bacillota
GAT
Ile
>WENV181992692
OHAR01000777
73009
Bacillota
CAG
Leu
>WENV181993082
OHAR01034536
291581
Bacillota
CGG
Pro
>WENV181992911
OHAR01009016
175859
Bacillota
TCT
Arg
>WENV181992676
OHAR01000659
290325
Bacillota
GCC
Gly
>WENV181992633
OHAR01000336
175831
Bacillota
ACG
Arg
>WENV181993081
OHAR01034536
480322
Bacillota
CTG
Gln
>WENV181992873
OHAR01006128
175868
Bacillota
GTT
Asn
>WENV181992920
OHAR01009704
322848
Bacillota
CTT
Lys
>WENV181992872
OHAR01006128
398854
Bacillota
CTC
Glu
>WENV181992895
OHAR01007574
480324
Bacillota
TTG
Gln
>WENV181993019
OHAR01019898
497729
Bacillota
CCA
Trp
>WENV181992955
OHAR01012120
323864
Bacillota
TGC
Ala
>WENV181992668
OHAR01000602
204381
Bacillota
GAT
Ile
>WENV181992903
OHAR01008145
280444
Bacillota
GGT
Thr
>WENV181992889
OHAR01006859
46643
Bacillota
TGA
Ser
>WENV181992792
OHAR01002656
179755
Bacillota
CCG
Arg
>WENV181992733
OHAR01001561
398832
Bacillota
TTC
Glu
>WENV181992789
OHAR01002635
280476
Bacillota
TTT
Lys
>WENV181992900
OHAR01008085
398852
Bacillota
CTC
Glu
>WENV181992609
OHAR01000192
285601
Bacillota
TTC
Glu
>WENV181992582
OHAR01000095
285756
Bacillota
GCC
Gly
>WENV181992842
OHAR01004783
398833
Bacillota
TGT
Thr
>WENV181992970
OHAR01013368
56074
Bacillota
TGA
Ser
>WENV181993004
OHAR01017883
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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