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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182000077
OHAX01000823
117741
Bacteroidota
TAG
Leu
>WENV182000237
OHAX01005003
398829
Bacteroidota
CCT
Arg
>WENV182000012
OHAX01000517
175838
Bacteroidota
GTT
Asn
>WENV182000013
OHAX01000517
175838
Bacteroidota
GTT
Asn
>WENV182000308
OHAX01011958
404226
Bacteroidota
CCT
Arg
>WENV182000342
OHAX01016378
175904
Bacteroidota
CGG
Pro
>WENV182000306
OHAX01011415
289031
Bacteroidota
CAT
Met
>WENV182000000
OHAX01000440
280553
Bacteroidota
TTT
Lys
>WENV182000196
OHAX01003337
280557
Bacteroidota
CAT
Met
>WENV182000173
OHAX01002598
20206
Bacteroidota
GGA
Ser
>WENV182000117
OHAX01001165
56493
Bacteroidota
TGA
Ser
>WENV182000294
OHAX01010039
175906
Bacteroidota
GTG
His
>WENV182000219
OHAX01004224
175903
Bacteroidota
GTG
His
>WENV182000338
OHAX01015523
280530
Bacteroidota
CCA
Trp
>WENV182000204
OHAX01003515
175936
Bacteroidota
CAT
Met
>WENV182000334
OHAX01015246
29791
Bacteroidota
GCT
Ser
>WENV182000317
OHAX01013326
20449
Bacteroidota
GGA
Ser
>WENV182000177
OHAX01002771
57807
Bacteroidota
TGA
Ser
>WENV182000290
OHAX01009913
175902
Bacteroidota
GGC
Ala
>WENV182000335
OHAX01015246
398860
Bacteroidota
CTC
Glu
>WENV182000248
OHAX01005847
480404
Bacteroidota
TTG
Gln
>WENV182000372
OHAX01021390
280451
Bacteroidota
CGT
Thr
>WENV182000160
OHAX01002013
99847
Bacteroidota
GTA
Tyr
>WENV182000376
OHAX01022307
399200
Bacteroidota
CAT
Met
>WENV182000312
OHAX01012527
186874
Bacteroidota
CAT
Met
>WENV182000258
OHAX01006161
399026
Bacteroidota
CCT
Arg
>WENV182000250
OHAX01005900
175844
Bacteroidota
GGC
Ala
>WENV182000180
OHAX01002870
175844
Bacteroidota
GGC
Ala
>WENV182000299
OHAX01010570
280532
Bacteroidota
>WENV182000336
OHAX01015343
480318
Bacteroidota
CTG
Gln
>WENV182000257
OHAX01006082
398828
Bacteroidota
CCG
Arg
>WENV182000274
OHAX01007983
480325
Bacteroidota
CTG
Gln
>WENV182000273
OHAX01007983
480325
Bacteroidota
CTG
Gln
>WENV181999993
OHAX01000400
176192
Bacteroidota
TCT
Arg
>WENV182000102
OHAX01001117
280446
Bacteroidota
TTT
Lys
>WENV182000140
OHAX01001631
117804
Bacteroidota
TAG
Leu
>WENV182000142
OHAX01001663
398836
Bacteroidota
GCA
Cys
>WENV182000101
OHAX01001112
398836
Bacteroidota
GCA
Cys
>WENV182000071
OHAX01000790
398836
Bacteroidota
GCA
Cys
>WENV181999989
OHAX01000372
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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