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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182000583
OHAY01000170
117741
Bacteroidota
TAG
Leu
>WENV182002124
OHAY01080646
404226
Bacteroidota
CCT
Arg
>WENV182001811
OHAY01018624
175904
Bacteroidota
CGG
Pro
>WENV182002106
OHAY01071313
400161
Bacteroidota
GGT
Thr
>WENV182000984
OHAY01001190
289031
Bacteroidota
CAT
Met
>WENV182001264
OHAY01003052
156422
Bacteroidota
TAC
Val
>WENV182000964
OHAY01001119
282852
Bacteroidota
TTT
Lys
>WENV182001708
OHAY01012313
280557
Bacteroidota
CAT
Met
>WENV182001660
OHAY01009920
280557
Bacteroidota
CAT
Met
>WENV182000538
OHAY01000122
280557
Bacteroidota
CAT
Met
>WENV182000483
OHAY01000043
20492
Bacteroidota
GGA
Ser
>WENV182000539
OHAY01000125
483416
Bacteroidota
CTG
Gln
>WENV182001253
OHAY01002912
398871
Bacteroidota
TTC
Glu
>WENV182000999
OHAY01001273
201819
Bacteroidota
CAT
Met
>WENV182001782
OHAY01016104
118221
Bacteroidota
CAA
Leu
>WENV182001592
OHAY01007668
118221
Bacteroidota
CAA
Leu
>WENV182001531
OHAY01006534
118221
Bacteroidota
CAA
Leu
>WENV182001153
OHAY01002183
118221
Bacteroidota
CAA
Leu
>WENV182001470
OHAY01005288
56493
Bacteroidota
TGA
Ser
>WENV182000685
OHAY01000302
56493
Bacteroidota
TGA
Ser
>WENV182000678
OHAY01000282
175903
Bacteroidota
GTG
His
>WENV182000600
OHAY01000197
351598
Bacteroidota
CGG
Pro
>WENV182001553
OHAY01006799
291612
Bacteroidota
>WENV182001821
OHAY01019183
118089
Bacteroidota
TAG
Leu
>WENV182001916
OHAY01028411
280530
Bacteroidota
CCA
Trp
>WENV182001845
OHAY01021677
203954
Bacteroidota
GTC
Asp
>WENV182001864
OHAY01023548
178907
Bacteroidota
TCT
Arg
>WENV182001051
OHAY01001529
178907
Bacteroidota
TCT
Arg
>WENV182000856
OHAY01000705
56385
Bacteroidota
TGA
Ser
>WENV182000763
OHAY01000491
56385
Bacteroidota
TGA
Ser
>WENV182000930
OHAY01000979
29791
Bacteroidota
GCT
Ser
>WENV182002090
OHAY01067705
182267
Bacteroidota
GTT
Asn
>WENV182001685
OHAY01011314
312035
Bacteroidota
CCA
Trp
>WENV182001407
OHAY01004407
242241
Bacteroidota
GTC
Asp
>WENV182001406
OHAY01004407
242241
Bacteroidota
GTC
Asp
>WENV182001405
OHAY01004407
242241
Bacteroidota
GTC
Asp
>WENV182000682
OHAY01000298
56072
Bacteroidota
TAA
Leu
>WENV182001045
OHAY01001463
57807
Bacteroidota
TGA
Ser
>WENV182001385
OHAY01004191
175944
Bacteroidota
CAT
Met
>WENV182001804
OHAY01017839
179697
Bacteroidota
TGT
Thr
>WENV182000931
OHAY01000979
398860
Bacteroidota
CTC
Glu
>WENV182001371
OHAY01004043
280451
Bacteroidota
CGT
Thr
>WENV182001047
OHAY01001516
99847
Bacteroidota
GTA
Tyr
>WENV182000998
OHAY01001255
99847
Bacteroidota
GTA
Tyr
>WENV182001870
OHAY01023945
399200
Bacteroidota
CAT
Met
>WENV182001670
OHAY01010452
404109
Bacteroidota
CTC
Glu
>WENV182000606
OHAY01000199
186874
Bacteroidota
CAT
Met
>WENV182001567
OHAY01007038
46648
Bacteroidota
TAA
Leu
>WENV182001306
OHAY01003416
46648
Bacteroidota
TAA
Leu
>WENV182000934
OHAY01001002
46648
Bacteroidota
TAA
Leu
>WENV182001200
OHAY01002553
332896
Bacteroidota
TTT
Lys
>WENV182001031
OHAY01001414
332896
Bacteroidota
TTT
Lys
>WENV182001001
OHAY01001284
332896
Bacteroidota
TTT
Lys
>WENV182000562
OHAY01000156
332896
Bacteroidota
TTT
Lys
>WENV182000545
OHAY01000130
332896
Bacteroidota
TTT
Lys
>WENV182001564
OHAY01006971
488746
Bacteroidota
CTG
Gln
>WENV182001261
OHAY01003044
280478
Bacteroidota
GCC
Gly
>WENV182001853
OHAY01022244
186108
Bacteroidota
GTT
Asn
>WENV182000967
OHAY01001127
175844
Bacteroidota
GGC
Ala
>WENV182001640
OHAY01009154
73011
Bacteroidota
CAA
Leu
>WENV182002079
OHAY01064161
480318
Bacteroidota
CTG
Gln
>WENV182001308
OHAY01003424
158068
Bacteroidota
GGG
Pro
>WENV182001169
OHAY01002297
398828
Bacteroidota
CCG
Arg
>WENV182001327
OHAY01003619
191205
Bacteroidota
TGG
Pro
>WENV182001932
OHAY01031403
74084
Bacteroidota
CAG
Leu
>WENV182001415
OHAY01004582
159415
Bacteroidota
TAC
Val
>WENV182001979
OHAY01041137
480325
Bacteroidota
CTG
Gln
>WENV182000509
OHAY01000083
176192
Bacteroidota
TCT
Arg
>WENV182001100
OHAY01001857
481328
Bacteroidota
TTG
Gln
>WENV182001723
OHAY01012759
491385
Bacteroidota
TTG
Gln
>WENV182000540
OHAY01000126
280446
Bacteroidota
TTT
Lys
>WENV182001825
OHAY01019607
484496
Bacteroidota
TTG
Gln
>WENV182001775
OHAY01015679
484496
Bacteroidota
TTG
Gln
>WENV182001139
OHAY01002084
484496
Bacteroidota
TTG
Gln
>WENV182001921
OHAY01029364
117804
Bacteroidota
TAG
Leu
>WENV182001771
OHAY01015315
398836
Bacteroidota
GCA
Cys
>WENV182001374
OHAY01004062
398836
Bacteroidota
GCA
Cys
>WENV182000901
OHAY01000849
398836
Bacteroidota
GCA
Cys
>WENV182000683
OHAY01000301
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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