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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182020203
OHCA01000024
285360
Bacteroidota
TTT
Lys
>WENV182020208
OHCA01000030
285360
Bacteroidota
TTT
Lys
>WENV182020892
OHCA01034774
398829
Bacteroidota
CCT
Arg
>WENV182020165
OHCA01000003
404226
Bacteroidota
CCT
Arg
>WENV182020416
OHCA01000366
175904
Bacteroidota
CGG
Pro
>WENV182020317
OHCA01000157
289031
Bacteroidota
CAT
Met
>WENV182020298
OHCA01000132
280553
Bacteroidota
TTT
Lys
>WENV182020163
OHCA01000003
280553
Bacteroidota
TTT
Lys
>WENV182020192
OHCA01000018
483416
Bacteroidota
CTG
Gln
>WENV182020167
OHCA01000003
398871
Bacteroidota
TTC
Glu
>WENV182020166
OHCA01000003
398871
Bacteroidota
TTC
Glu
>WENV182020319
OHCA01000158
175906
Bacteroidota
GTG
His
>WENV182020318
OHCA01000158
175906
Bacteroidota
GTG
His
>WENV182020482
OHCA01000843
351598
Bacteroidota
CGG
Pro
>WENV182020221
OHCA01000043
351598
Bacteroidota
CGG
Pro
>WENV182020215
OHCA01000032
351598
Bacteroidota
CGG
Pro
>WENV182020223
OHCA01000044
118089
Bacteroidota
TAG
Leu
>WENV182020417
OHCA01000366
280530
Bacteroidota
CCA
Trp
>WENV182020303
OHCA01000136
178907
Bacteroidota
TCT
Arg
>WENV182020194
OHCA01000019
405877
Bacteroidota
GGT
Thr
>WENV182020253
OHCA01000071
20449
Bacteroidota
GGA
Ser
>WENV182020354
OHCA01000215
21127
Bacteroidota
GGA
Ser
>WENV182020210
OHCA01000030
398860
Bacteroidota
CTC
Glu
>WENV182020413
OHCA01000360
480404
Bacteroidota
TTG
Gln
>WENV182020475
OHCA01000761
174201
Bacteroidota
GGG
Pro
>WENV182020294
OHCA01000120
99847
Bacteroidota
GTA
Tyr
>WENV182020226
OHCA01000046
399200
Bacteroidota
CAT
Met
>WENV182020180
OHCA01000010
399200
Bacteroidota
CAT
Met
>WENV182020307
OHCA01000145
186874
Bacteroidota
CAT
Met
>WENV182020222
OHCA01000044
73011
Bacteroidota
CAA
Leu
>WENV182020717
OHCA01008221
186142
Bacteroidota
GAT
Ile
>WENV182020250
OHCA01000071
74084
Bacteroidota
CAG
Leu
>WENV182020358
OHCA01000229
159415
Bacteroidota
TAC
Val
>WENV182020357
OHCA01000229
159415
Bacteroidota
TAC
Val
>WENV182020182
OHCA01000012
480325
Bacteroidota
CTG
Gln
>WENV182020183
OHCA01000012
480325
Bacteroidota
CTG
Gln
>WENV182020299
OHCA01000134
176192
Bacteroidota
TCT
Arg
>WENV182020295
OHCA01000125
176192
Bacteroidota
TCT
Arg
>WENV182020256
OHCA01000075
400088
Bacteroidota
GGT
Thr
>WENV182020423
OHCA01000384
69204
Bacteroidota
TGA
Ser
>WENV182020412
OHCA01000358
69204
Bacteroidota
TGA
Ser
>WENV182020709
OHCA01007501
484496
Bacteroidota
TTG
Gln
>WENV182020305
OHCA01000137
27502
Bacteroidota
GGA
Ser
>WENV182020304
OHCA01000136
285750
Bacteroidota
CCC
Gly
>WENV182020718
OHCA01008221
186143
Bacteroidota
TGC
Ala
>WENV182020334
OHCA01000175
365112
Bacteroidota
TTT
Lys
>WENV182020448
OHCA01000539
398836
Bacteroidota
GCA
Cys
>WENV182020371
OHCA01000263
398836
Bacteroidota
GCA
Cys
>WENV182020239
OHCA01000060
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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