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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182022599
OHCD01003244
343590
Bacillota
GCC
Gly
>WENV182022600
OHCD01003244
343590
Bacillota
GCC
Gly
>WENV182022798
OHCD01015497
280500
Bacillota
TGC
Ala
>WENV182022279
OHCD01000018
349107
Bacillota
GCC
Gly
>WENV182022443
OHCD01000571
349107
Bacillota
GCC
Gly
>WENV182022471
OHCD01000847
405363
Bacillota
GCA
Cys
>WENV182022278
OHCD01000018
280428
Bacillota
GAA
Phe
>WENV182022708
OHCD01007709
280492
Bacillota
CTT
Lys
>WENV182022491
OHCD01000967
175842
Bacillota
CAC
Val
>WENV182022902
OHCD01038734
184497
Bacillota
GGG
Pro
>WENV182022765
OHCD01011822
295166
Bacillota
TGC
Ala
>WENV182022476
OHCD01000856
190476
Bacillota
CAT
Met
>WENV182022568
OHCD01002292
82124
Bacillota
TAA
Leu
>WENV182022426
OHCD01000498
73664
Bacillota
CAG
Leu
>WENV182022395
OHCD01000370
280447
Bacillota
GAC
Val
>WENV182022385
OHCD01000300
280447
Bacillota
GAC
Val
>WENV182022413
OHCD01000429
5692
Bacillota
GCT
Ser
>WENV182022294
OHCD01000039
73009
Bacillota
CAG
Leu
>WENV182022683
OHCD01006813
481217
Bacillota
GCA
Cys
>WENV182022624
OHCD01004018
291581
Bacillota
CGG
Pro
>WENV182022460
OHCD01000710
175859
Bacillota
TCT
Arg
>WENV182022750
OHCD01011168
398835
Bacillota
GCC
Gly
>WENV182022566
OHCD01002292
175847
Bacillota
GTC
Asp
>WENV182022542
OHCD01001613
175831
Bacillota
ACG
Arg
>WENV182022725
OHCD01008999
346451
Bacillota
TTT
Lys
>WENV182022479
OHCD01000892
27216
Bacillota
GCT
Ser
>WENV182022275
OHCD01000013
480322
Bacillota
CTG
Gln
>WENV182022802
OHCD01015604
187364
Bacillota
CAT
Met
>WENV182022581
OHCD01002503
175868
Bacillota
GTT
Asn
>WENV182022281
OHCD01000018
175868
Bacillota
GTT
Asn
>WENV182022452
OHCD01000655
398854
Bacillota
CTC
Glu
>WENV182022529
OHCD01001401
291576
Bacillota
CCC
Gly
>WENV182022472
OHCD01000847
480324
Bacillota
TTG
Gln
>WENV182022264
OHCD01000005
497729
Bacillota
CCA
Trp
>WENV182022596
OHCD01003000
56079
Bacillota
AAG
Leu
>WENV182022901
OHCD01038334
292374
Bacillota
TGC
Ala
>WENV182022640
OHCD01004529
204381
Bacillota
GAT
Ile
>WENV182022587
OHCD01002613
117745
Bacillota
GTA
Tyr
>WENV182022648
OHCD01004798
280444
Bacillota
GGT
Thr
>WENV182022396
OHCD01000370
280444
Bacillota
GGT
Thr
>WENV182022605
OHCD01003411
483485
Bacillota
CCC
Gly
>WENV182022799
OHCD01015559
291597
Bacillota
TGC
Ala
>WENV182022501
OHCD01001046
46643
Bacillota
TGA
Ser
>WENV182022344
OHCD01000130
179755
Bacillota
CCG
Arg
>WENV182022685
OHCD01006855
46835
Bacillota
TAA
Leu
>WENV182022477
OHCD01000856
398832
Bacillota
TTC
Glu
>WENV182022896
OHCD01037002
118669
Bacillota
GTA
Tyr
>WENV182022540
OHCD01001580
280462
Bacillota
GAA
Phe
>WENV182022470
OHCD01000825
398852
Bacillota
CTC
Glu
>WENV182022900
OHCD01038334
201856
Bacillota
GAT
Ile
>WENV182022864
OHCD01030115
289123
Bacillota
GGT
Thr
>WENV182022455
OHCD01000662
398833
Bacillota
TGT
Thr
>WENV182022428
OHCD01000509
398833
Bacillota
TGT
Thr
>WENV182022647
OHCD01004798
175849
Bacillota
GTC
Asp
>WENV182022827
OHCD01020214
280486
Bacillota
TGC
Ala
>WENV182022595
OHCD01002915
405393
Bacillota
GCC
Gly
>WENV182022340
OHCD01000114
56074
Bacillota
TGA
Ser
>WENV182022483
OHCD01000921
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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