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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182022298
OHCD01000042
172207
Bacteroidota
GGG
Pro
>WENV182022601
OHCD01003278
285360
Bacteroidota
TTT
Lys
>WENV182022347
OHCD01000138
117741
Bacteroidota
TAG
Leu
>WENV182022399
OHCD01000380
398829
Bacteroidota
CCT
Arg
>WENV182022458
OHCD01000679
398829
Bacteroidota
CCT
Arg
>WENV182022454
OHCD01000656
404226
Bacteroidota
CCT
Arg
>WENV182022769
OHCD01012049
175904
Bacteroidota
CGG
Pro
>WENV182022582
OHCD01002561
400161
Bacteroidota
GGT
Thr
>WENV182022598
OHCD01003206
289031
Bacteroidota
CAT
Met
>WENV182022312
OHCD01000056
280557
Bacteroidota
CAT
Met
>WENV182022300
OHCD01000042
20206
Bacteroidota
GGA
Ser
>WENV182022544
OHCD01001666
483416
Bacteroidota
CTG
Gln
>WENV182022735
OHCD01009448
398871
Bacteroidota
TTC
Glu
>WENV182022434
OHCD01000557
56493
Bacteroidota
TGA
Ser
>WENV182022705
OHCD01007608
175906
Bacteroidota
GTG
His
>WENV182022354
OHCD01000165
175903
Bacteroidota
GTG
His
>WENV182022276
OHCD01000016
351598
Bacteroidota
CGG
Pro
>WENV182022739
OHCD01009630
118089
Bacteroidota
TAG
Leu
>WENV182022425
OHCD01000495
178571
Bacteroidota
GTT
Asn
>WENV182022710
OHCD01007846
172085
Bacteroidota
TAC
Val
>WENV182022468
OHCD01000781
56385
Bacteroidota
TGA
Ser
>WENV182022807
OHCD01016007
29791
Bacteroidota
GCT
Ser
>WENV182022861
OHCD01030085
182267
Bacteroidota
GTT
Asn
>WENV182022690
OHCD01007022
20449
Bacteroidota
GGA
Ser
>WENV182022308
OHCD01000052
56072
Bacteroidota
TAA
Leu
>WENV182022284
OHCD01000022
175902
Bacteroidota
GGC
Ala
>WENV182022530
OHCD01001406
283315
Bacteroidota
CGT
Thr
>WENV182022597
OHCD01003175
398860
Bacteroidota
CTC
Glu
>WENV182022380
OHCD01000265
156128
Bacteroidota
GGG
Pro
>WENV182022408
OHCD01000419
280451
Bacteroidota
CGT
Thr
>WENV182022814
OHCD01016969
418894
Bacteroidota
TTC
Glu
>WENV182022387
OHCD01000302
99847
Bacteroidota
GTA
Tyr
>WENV182022375
OHCD01000246
99847
Bacteroidota
GTA
Tyr
>WENV182022420
OHCD01000439
404109
Bacteroidota
CTC
Glu
>WENV182022553
OHCD01001960
186874
Bacteroidota
CAT
Met
>WENV182022342
OHCD01000119
488746
Bacteroidota
CTG
Gln
>WENV182022299
OHCD01000042
488746
Bacteroidota
CTG
Gln
>WENV182022766
OHCD01011934
280478
Bacteroidota
GCC
Gly
>WENV182022545
OHCD01001742
27524
Bacteroidota
GGA
Ser
>WENV182022417
OHCD01000439
187814
Bacteroidota
GTC
Asp
>WENV182022594
OHCD01002896
178134
Bacteroidota
TGG
Pro
>WENV182022335
OHCD01000097
398828
Bacteroidota
CCG
Arg
>WENV182022625
OHCD01004036
481044
Bacteroidota
>WENV182022858
OHCD01029689
74084
Bacteroidota
CAG
Leu
>WENV182022659
OHCD01005514
159415
Bacteroidota
TAC
Val
>WENV182022389
OHCD01000304
69204
Bacteroidota
TGA
Ser
>WENV182022497
OHCD01001029
280446
Bacteroidota
TTT
Lys
>WENV182022372
OHCD01000231
280446
Bacteroidota
TTT
Lys
>WENV182022361
OHCD01000183
484496
Bacteroidota
TTG
Gln
>WENV182022274
OHCD01000012
484496
Bacteroidota
TTG
Gln
>WENV182022355
OHCD01000165
27502
Bacteroidota
GGA
Ser
>WENV182022285
OHCD01000023
27502
Bacteroidota
GGA
Ser
>WENV182022351
OHCD01000160
365112
Bacteroidota
TTT
Lys
>WENV182022522
OHCD01001229
398836
Bacteroidota
GCA
Cys
>WENV182022500
OHCD01001045
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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