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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182024456
OHCF01028674
179231
Actinomycetota
TAC
Val
>WENV182024429
OHCF01023389
56083
Actinomycetota
CGA
Ser
>WENV182024421
OHCF01022774
280549
Actinomycetota
CAC
Val
>WENV182024414
OHCF01021660
176077
Actinomycetota
CAT
Met
>WENV182024423
OHCF01022860
398948
Actinomycetota
TTC
Glu
>WENV182024281
OHCF01009553
191955
Actinomycetota
TGT
Thr
>WENV182024425
OHCF01023117
280544
Actinomycetota
GTG
His
>WENV182024432
OHCF01024072
280496
Actinomycetota
CGT
Thr
>WENV182024504
OHCF01037335
184157
Actinomycetota
TGG
Pro
>WENV182024477
OHCF01033202
480329
Actinomycetota
CCC
Gly
>WENV182024488
OHCF01034377
398853
Actinomycetota
CTG
Gln
>WENV182024499
OHCF01036434
175843
Actinomycetota
CAA
Leu
>WENV182024559
OHCF01048454
56075
Actinomycetota
TGA
Ser
>WENV182024449
OHCF01027190
317680
Actinomycetota
CCG
Arg
>WENV182024560
OHCF01048932
117903
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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