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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182025724
OHCJ01002158
99852
Bacillota
GTA
Tyr
>WENV182025776
OHCJ01003635
99852
Bacillota
GTA
Tyr
>WENV182025887
OHCJ01017283
280500
Bacillota
TGC
Ala
>WENV182025633
OHCJ01000474
349107
Bacillota
GCC
Gly
>WENV182025805
OHCJ01006184
405363
Bacillota
GCA
Cys
>WENV182025632
OHCJ01000474
280428
Bacillota
GAA
Phe
>WENV182025744
OHCJ01002411
280492
Bacillota
CTT
Lys
>WENV182025629
OHCJ01000451
175842
Bacillota
CAC
Val
>WENV182025587
OHCJ01000122
190476
Bacillota
CAT
Met
>WENV182025761
OHCJ01002902
73664
Bacillota
CAG
Leu
>WENV182025690
OHCJ01001570
280447
Bacillota
GAC
Val
>WENV182025590
OHCJ01000137
280447
Bacillota
GAC
Val
>WENV182025636
OHCJ01000489
5692
Bacillota
GCT
Ser
>WENV182025822
OHCJ01007189
175825
Bacillota
GAT
Ile
>WENV182025630
OHCJ01000452
73009
Bacillota
CAG
Leu
>WENV182025793
OHCJ01004827
291581
Bacillota
CGG
Pro
>WENV182025584
OHCJ01000105
291581
Bacillota
CGG
Pro
>WENV182025821
OHCJ01007189
280436
Bacillota
TGC
Ala
>WENV182025792
OHCJ01004827
480322
Bacillota
CTG
Gln
>WENV182025676
OHCJ01000994
480322
Bacillota
CTG
Gln
>WENV182025624
OHCJ01000371
480322
Bacillota
CTG
Gln
>WENV182025583
OHCJ01000105
480322
Bacillota
CTG
Gln
>WENV182025621
OHCJ01000336
175868
Bacillota
GTT
Asn
>WENV182025602
OHCJ01000208
291576
Bacillota
CCC
Gly
>WENV182025771
OHCJ01003375
480324
Bacillota
TTG
Gln
>WENV182025879
OHCJ01014999
303718
Bacillota
TGT
Thr
>WENV182025760
OHCJ01002902
56079
Bacillota
AAG
Leu
>WENV182025749
OHCJ01002427
117745
Bacillota
GTA
Tyr
>WENV182025612
OHCJ01000290
280444
Bacillota
GGT
Thr
>WENV182025672
OHCJ01000954
46643
Bacillota
TGA
Ser
>WENV182025660
OHCJ01000860
179755
Bacillota
CCG
Arg
>WENV182025619
OHCJ01000304
179755
Bacillota
CCG
Arg
>WENV182025913
OHCJ01024021
46835
Bacillota
TAA
Leu
>WENV182025588
OHCJ01000122
398832
Bacillota
TTC
Glu
>WENV182025674
OHCJ01000986
398852
Bacillota
CTC
Glu
>WENV182025704
OHCJ01001771
175857
Bacillota
GTG
His
>WENV182025662
OHCJ01000893
398833
Bacillota
TGT
Thr
>WENV182025611
OHCJ01000290
175849
Bacillota
GTC
Asp
>WENV182025706
OHCJ01001771
280463
Bacillota
TTT
Lys
>WENV182025635
OHCJ01000489
56074
Bacillota
TGA
Ser
>WENV182025758
OHCJ01002862
280473
Bacillota
TGG
Pro
>WENV182025730
OHCJ01002271
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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