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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182030647
OHCR01043455
99852
Bacillota
GTA
Tyr
>WENV182030409
OHCR01008170
343590
Bacillota
GCC
Gly
>WENV182029935
OHCR01000107
280492
Bacillota
CTT
Lys
>WENV182030525
OHCR01018520
175842
Bacillota
CAC
Val
>WENV182030477
OHCR01013365
179563
Bacillota
GAT
Ile
>WENV182030476
OHCR01013365
295166
Bacillota
TGC
Ala
>WENV182030563
OHCR01024322
190476
Bacillota
CAT
Met
>WENV182030075
OHCR01000522
73664
Bacillota
CAG
Leu
>WENV182030377
OHCR01006865
280447
Bacillota
GAC
Val
>WENV182030317
OHCR01004110
5692
Bacillota
GCT
Ser
>WENV182030486
OHCR01013945
73009
Bacillota
CAG
Leu
>WENV182030531
OHCR01019161
175831
Bacillota
ACG
Arg
>WENV182030393
OHCR01007456
353153
Bacillota
TGC
Ala
>WENV182030385
OHCR01007159
284627
Bacillota
GAA
Phe
>WENV182030493
OHCR01014774
480322
Bacillota
CTG
Gln
>WENV182029946
OHCR01000110
401685
Bacillota
TTG
Gln
>WENV182030279
OHCR01003222
175868
Bacillota
GTT
Asn
>WENV182030278
OHCR01003222
398854
Bacillota
CTC
Glu
>WENV182030544
OHCR01020946
480324
Bacillota
TTG
Gln
>WENV182030518
OHCR01016805
497729
Bacillota
CCA
Trp
>WENV182029994
OHCR01000194
303718
Bacillota
TGT
Thr
>WENV182030026
OHCR01000301
56079
Bacillota
AAG
Leu
>WENV182030585
OHCR01028229
332891
Bacillota
TGC
Ala
>WENV182030572
OHCR01025583
46655
Bacillota
TGA
Ser
>WENV182030047
OHCR01000382
117745
Bacillota
GTA
Tyr
>WENV182030314
OHCR01004046
280444
Bacillota
GGT
Thr
>WENV182030220
OHCR01002005
483485
Bacillota
CCC
Gly
>WENV182030256
OHCR01002903
46643
Bacillota
TGA
Ser
>WENV182030564
OHCR01024322
398832
Bacillota
TTC
Glu
>WENV182029879
OHCR01000019
398832
Bacillota
TTC
Glu
>WENV182030017
OHCR01000274
280462
Bacillota
GAA
Phe
>WENV182030176
OHCR01001283
398852
Bacillota
CTC
Glu
>WENV182029988
OHCR01000187
175857
Bacillota
GTG
His
>WENV182029893
OHCR01000027
285756
Bacillota
GCC
Gly
>WENV182030490
OHCR01014658
398833
Bacillota
TGT
Thr
>WENV182029990
OHCR01000187
280463
Bacillota
TTT
Lys
>WENV182030316
OHCR01004110
56074
Bacillota
TGA
Ser
>WENV182030370
OHCR01006338
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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