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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182031222
OHCS01005869
406043
Verrucomicrobiota
GCA
Cys
>WENV182030980
OHCS01000959
293125
Verrucomicrobiota
GAA
Phe
>WENV182031312
OHCS01009399
406350
Verrucomicrobiota
TGT
Thr
>WENV182031167
OHCS01004166
148006
Verrucomicrobiota
CAA
Leu
>WENV182031013
OHCS01001263
293105
Verrucomicrobiota
CAT
Met
>WENV182030880
OHCS01000504
405901
Verrucomicrobiota
GCC
Gly
>WENV182030914
OHCS01000594
483642
Verrucomicrobiota
CCC
Gly
>WENV182030952
OHCS01000702
229220
Verrucomicrobiota
CAT
Met
>WENV182030904
OHCS01000571
8960
Verrucomicrobiota
CGA
Ser
>WENV182030927
OHCS01000644
101463
Verrucomicrobiota
TAA
Leu
>WENV182030840
OHCS01000335
157427
Verrucomicrobiota
GTC
Asp
>WENV182030774
OHCS01000155
293079
Verrucomicrobiota
CGC
Ala
>WENV182030843
OHCS01000342
120352
Verrucomicrobiota
TAG
Leu
>WENV182030928
OHCS01000644
292636
Verrucomicrobiota
>WENV182030915
OHCS01000594
489412
Verrucomicrobiota
TCC
Gly
>WENV182031223
OHCS01005869
298263
Verrucomicrobiota
TTC
Glu
>WENV182031011
OHCS01001263
298263
Verrucomicrobiota
TTC
Glu
>WENV182031025
OHCS01001459
293069
Verrucomicrobiota
CTT
Lys
>WENV182030946
OHCS01000678
406336
Verrucomicrobiota
CCT
Arg
>WENV182030965
OHCS01000845
406369
Verrucomicrobiota
CCG
Arg
>WENV182031006
OHCS01001204
405940
Verrucomicrobiota
GGT
Thr
>WENV182030916
OHCS01000610
406044
Verrucomicrobiota
CTG
Gln
>WENV182030820
OHCS01000262
187556
Verrucomicrobiota
GGG
Pro
>WENV182031012
OHCS01001263
406037
Verrucomicrobiota
GTG
His
>WENV182031133
OHCS01003475
406360
Verrucomicrobiota
GAC
Val
>WENV182030972
OHCS01000900
187548
Verrucomicrobiota
TCT
Arg
>WENV182031024
OHCS01001459
406040
Verrucomicrobiota
CGT
Thr
>WENV182030954
OHCS01000728
57652
Verrucomicrobiota
TGA
Ser
>WENV182031057
OHCS01001906
406039
Verrucomicrobiota
CAC
Val
>WENV182030876
OHCS01000482
75458
Verrucomicrobiota
CAG
Leu
>WENV182030826
OHCS01000295
406368
Verrucomicrobiota
TTG
Gln
>WENV182030874
OHCS01000477
21159
Verrucomicrobiota
GGA
Ser
>WENV182031141
OHCS01003633
101461
Verrucomicrobiota
GTA
Tyr
>WENV182031187
OHCS01004838
293095
Verrucomicrobiota
TTT
Lys
>WENV182031009
OHCS01001248
187561
Verrucomicrobiota
CGG
Pro
>WENV182030955
OHCS01000728
406342
Verrucomicrobiota
CAT
Met
>WENV182030940
OHCS01000665
406351
Verrucomicrobiota
GTT
Asn
>WENV182030825
OHCS01000295
303305
Verrucomicrobiota
GGC
Ala
>WENV182030929
OHCS01000644
8938
Verrucomicrobiota
GCT
Ser
>WENV182030981
OHCS01000959
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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