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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182032145
OHCU01000202
99852
Bacillota
GTA
Tyr
>WENV182032343
OHCU01003340
234991
Bacillota
GAT
Ile
>WENV182032240
OHCU01001070
404076
Bacillota
GCC
Gly
>WENV182032143
OHCU01000202
349107
Bacillota
GCC
Gly
>WENV182032159
OHCU01000274
349107
Bacillota
GCC
Gly
>WENV182032239
OHCU01001070
184504
Bacillota
GTC
Asp
>WENV182032144
OHCU01000202
405363
Bacillota
GCA
Cys
>WENV182032158
OHCU01000274
280428
Bacillota
GAA
Phe
>WENV182032263
OHCU01001323
179917
Bacillota
CAT
Met
>WENV182032151
OHCU01000249
175842
Bacillota
CAC
Val
>WENV182032482
OHCU01018388
179176
Bacillota
ACG
Arg
>WENV182032344
OHCU01003340
295166
Bacillota
TGC
Ala
>WENV182032347
OHCU01003502
404079
Bacillota
CAT
Met
>WENV182032190
OHCU01000531
190476
Bacillota
CAT
Met
>WENV182032139
OHCU01000179
280447
Bacillota
GAC
Val
>WENV182032130
OHCU01000143
5692
Bacillota
GCT
Ser
>WENV182032411
OHCU01007857
284723
Bacillota
TAC
Val
>WENV182032277
OHCU01001586
73009
Bacillota
CAG
Leu
>WENV182032458
OHCU01014300
407726
Bacillota
CTG
Gln
>WENV182032181
OHCU01000424
291581
Bacillota
CGG
Pro
>WENV182032246
OHCU01001132
398835
Bacillota
GCC
Gly
>WENV182032118
OHCU01000112
175831
Bacillota
ACG
Arg
>WENV182032108
OHCU01000102
179810
Bacillota
TCT
Arg
>WENV182032418
OHCU01008769
291634
Bacillota
GAA
Phe
>WENV182032432
OHCU01010734
183957
Bacillota
CCT
Arg
>WENV182032467
OHCU01015870
346451
Bacillota
TTT
Lys
>WENV182032478
OHCU01017806
295350
Bacillota
TGC
Ala
>WENV182032180
OHCU01000424
480322
Bacillota
CTG
Gln
>WENV182032131
OHCU01000150
480322
Bacillota
CTG
Gln
>WENV182032412
OHCU01007857
187364
Bacillota
CAT
Met
>WENV182032332
OHCU01003100
401685
Bacillota
TTG
Gln
>WENV182032046
OHCU01000028
175868
Bacillota
GTT
Asn
>WENV182032045
OHCU01000028
398854
Bacillota
CTC
Glu
>WENV182032162
OHCU01000277
291576
Bacillota
CCC
Gly
>WENV182032186
OHCU01000499
497729
Bacillota
CCA
Trp
>WENV182032442
OHCU01012041
292374
Bacillota
TGC
Ala
>WENV182032201
OHCU01000672
398857
Bacillota
TTC
Glu
>WENV182032127
OHCU01000121
280444
Bacillota
GGT
Thr
>WENV182032123
OHCU01000121
280444
Bacillota
GGT
Thr
>WENV182032174
OHCU01000400
179755
Bacillota
CCG
Arg
>WENV182032267
OHCU01001386
330413
Bacillota
CTT
Lys
>WENV182032191
OHCU01000531
398832
Bacillota
TTC
Glu
>WENV182032067
OHCU01000045
118669
Bacillota
GTA
Tyr
>WENV182032208
OHCU01000714
52748
Bacillota
TGA
Ser
>WENV182032063
OHCU01000034
398852
Bacillota
CTC
Glu
>WENV182032062
OHCU01000034
398852
Bacillota
CTC
Glu
>WENV182032061
OHCU01000034
398852
Bacillota
CTC
Glu
>WENV182032441
OHCU01012041
201856
Bacillota
GAT
Ile
>WENV182032310
OHCU01002238
289123
Bacillota
GGT
Thr
>WENV182032109
OHCU01000102
175857
Bacillota
GTG
His
>WENV182032176
OHCU01000402
398833
Bacillota
TGT
Thr
>WENV182032395
OHCU01006496
285556
Bacillota
TGT
Thr
>WENV182032126
OHCU01000121
175849
Bacillota
GTC
Asp
>WENV182032276
OHCU01001543
405393
Bacillota
GCC
Gly
>WENV182032129
OHCU01000143
56074
Bacillota
TGA
Ser
>WENV182032303
OHCU01002049
482078
Bacillota
CCC
Gly
>WENV182032122
OHCU01000120
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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