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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182035434
OHDA01000398
406043
Verrucomicrobiota
GCA
Cys
>WENV182035518
OHDA01000809
293125
Verrucomicrobiota
GAA
Phe
>WENV182035740
OHDA01004767
406350
Verrucomicrobiota
TGT
Thr
>WENV182035680
OHDA01003211
148006
Verrucomicrobiota
CAA
Leu
>WENV182035498
OHDA01000701
405901
Verrucomicrobiota
GCC
Gly
>WENV182035625
OHDA01002097
405901
Verrucomicrobiota
GCC
Gly
>WENV182035604
OHDA01001682
483642
Verrucomicrobiota
CCC
Gly
>WENV182035414
OHDA01000280
229220
Verrucomicrobiota
CAT
Met
>WENV182035380
OHDA01000206
8960
Verrucomicrobiota
CGA
Ser
>WENV182035505
OHDA01000721
101463
Verrucomicrobiota
TAA
Leu
>WENV182035479
OHDA01000608
157427
Verrucomicrobiota
GTC
Asp
>WENV182035612
OHDA01001769
293079
Verrucomicrobiota
CGC
Ala
>WENV182035899
OHDA01015363
120352
Verrucomicrobiota
TAG
Leu
>WENV182035506
OHDA01000721
292636
Verrucomicrobiota
>WENV182035605
OHDA01001682
489412
Verrucomicrobiota
TCC
Gly
>WENV182035517
OHDA01000804
298263
Verrucomicrobiota
TTC
Glu
>WENV182035516
OHDA01000804
298263
Verrucomicrobiota
TTC
Glu
>WENV182035508
OHDA01000743
298263
Verrucomicrobiota
TTC
Glu
>WENV182035822
OHDA01008500
406336
Verrucomicrobiota
CCT
Arg
>WENV182035486
OHDA01000646
406369
Verrucomicrobiota
CCG
Arg
>WENV182035503
OHDA01000717
405940
Verrucomicrobiota
GGT
Thr
>WENV182035675
OHDA01003171
406044
Verrucomicrobiota
CTG
Gln
>WENV182035525
OHDA01000921
187556
Verrucomicrobiota
GGG
Pro
>WENV182035509
OHDA01000743
406037
Verrucomicrobiota
GTG
His
>WENV182035627
OHDA01002173
406360
Verrucomicrobiota
GAC
Val
>WENV182035447
OHDA01000423
187548
Verrucomicrobiota
TCT
Arg
>WENV182035601
OHDA01001659
57652
Verrucomicrobiota
TGA
Ser
>WENV182035511
OHDA01000752
75458
Verrucomicrobiota
CAG
Leu
>WENV182035882
OHDA01012640
406368
Verrucomicrobiota
TTG
Gln
>WENV182035369
OHDA01000167
21159
Verrucomicrobiota
GGA
Ser
>WENV182035364
OHDA01000148
101461
Verrucomicrobiota
GTA
Tyr
>WENV182035418
OHDA01000304
293095
Verrucomicrobiota
TTT
Lys
>WENV182035593
OHDA01001485
187561
Verrucomicrobiota
CGG
Pro
>WENV182035803
OHDA01007399
406342
Verrucomicrobiota
CAT
Met
>WENV182035492
OHDA01000689
406351
Verrucomicrobiota
GTT
Asn
>WENV182035546
OHDA01001145
303305
Verrucomicrobiota
GGC
Ala
>WENV182035618
OHDA01001958
406346
Verrucomicrobiota
TAC
Val
>WENV182035602
OHDA01001664
8938
Verrucomicrobiota
GCT
Ser
>WENV182035519
OHDA01000809
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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