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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182037371
OHDD01000496
117741
Bacteroidota
TAG
Leu
>WENV182037359
OHDD01000424
398829
Bacteroidota
CCT
Arg
>WENV182037202
OHDD01000036
400161
Bacteroidota
GGT
Thr
>WENV182037183
OHDD01000015
289031
Bacteroidota
CAT
Met
>WENV182037273
OHDD01000161
156422
Bacteroidota
TAC
Val
>WENV182037549
OHDD01003182
280557
Bacteroidota
CAT
Met
>WENV182037263
OHDD01000135
280557
Bacteroidota
CAT
Met
>WENV182037259
OHDD01000131
280557
Bacteroidota
CAT
Met
>WENV182037388
OHDD01000571
20206
Bacteroidota
GGA
Ser
>WENV182037379
OHDD01000540
483416
Bacteroidota
CTG
Gln
>WENV182037848
OHDD01031760
398871
Bacteroidota
TTC
Glu
>WENV182037252
OHDD01000120
118221
Bacteroidota
CAA
Leu
>WENV182037213
OHDD01000058
56493
Bacteroidota
TGA
Ser
>WENV182037309
OHDD01000258
175903
Bacteroidota
GTG
His
>WENV182037375
OHDD01000520
351598
Bacteroidota
CGG
Pro
>WENV182037652
OHDD01007200
156068
Bacteroidota
TAC
Val
>WENV182037274
OHDD01000161
172085
Bacteroidota
TAC
Val
>WENV182037171
OHDD01000007
56385
Bacteroidota
TGA
Ser
>WENV182037805
OHDD01022256
182267
Bacteroidota
GTT
Asn
>WENV182037203
OHDD01000036
312035
Bacteroidota
CCA
Trp
>WENV182037434
OHDD01001061
242241
Bacteroidota
GTC
Asp
>WENV182037838
OHDD01028177
175886
Bacteroidota
GGC
Ala
>WENV182037544
OHDD01003031
280451
Bacteroidota
CGT
Thr
>WENV182037221
OHDD01000066
280451
Bacteroidota
CGT
Thr
>WENV182037701
OHDD01011237
99847
Bacteroidota
GTA
Tyr
>WENV182037320
OHDD01000304
99847
Bacteroidota
GTA
Tyr
>WENV182037275
OHDD01000166
99847
Bacteroidota
GTA
Tyr
>WENV182037445
OHDD01001269
404109
Bacteroidota
CTC
Glu
>WENV182037303
OHDD01000226
404109
Bacteroidota
CTC
Glu
>WENV182037350
OHDD01000381
186874
Bacteroidota
CAT
Met
>WENV182037162
OHDD01000005
46648
Bacteroidota
TAA
Leu
>WENV182037433
OHDD01001033
488746
Bacteroidota
CTG
Gln
>WENV182037196
OHDD01000034
488746
Bacteroidota
CTG
Gln
>WENV182037197
OHDD01000034
27524
Bacteroidota
GGA
Ser
>WENV182037614
OHDD01005307
187400
Bacteroidota
GTT
Asn
>WENV182037363
OHDD01000460
398828
Bacteroidota
CCG
Arg
>WENV182037255
OHDD01000122
398828
Bacteroidota
CCG
Arg
>WENV182037164
OHDD01000005
481328
Bacteroidota
TTG
Gln
>WENV182037410
OHDD01000774
69204
Bacteroidota
TGA
Ser
>WENV182037398
OHDD01000630
280446
Bacteroidota
TTT
Lys
>WENV182037173
OHDD01000008
484496
Bacteroidota
TTG
Gln
>WENV182037271
OHDD01000143
27502
Bacteroidota
GGA
Ser
>WENV182037473
OHDD01001558
398836
Bacteroidota
GCA
Cys
>WENV182037210
OHDD01000055
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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